RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 PTPDC1A2A3K4 754 aa13.41□□□□□ -0.26
CTCFL-202ENST00000371196 GNAT3A8MTJ3 354 aa13.41□□□□□ -0.26
CTCFL-202ENST00000371196 ALDH1L1O75891 902 aa13.41□□□□□ -0.26
CTCFL-202ENST00000371196 CORO7P57737 925 aa13.41□□□□□ -0.26
CTCFL-202ENST00000371196 GUCY1B3Q02153 619 aa13.41□□□□□ -0.26
CTCFL-202ENST00000371196 BEND6Q5SZJ8 279 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-202ENST00000371196 ILDR1Q86SU0 546 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-202ENST00000371196 TMEM139Q8IV31 216 aa13.41□□□□□ -0.26
CTCFL-202ENST00000371196 KIFC2Q96AC6 838 aa13.41□□□□□ -0.26
CTCFL-202ENST00000371196 NEDD4P46934 1319 aa13.41□□□□□ -0.26
CTCFL-202ENST00000371196 CTDNEP1O95476 244 aa13.4□□□□□ -0.26
CTCFL-202ENST00000371196 SF3A1Q15459 793 aaKnown RBP13.4□□□□□ -0.26
CTCFL-202ENST00000371196 VSTM4Q8IW00 320 aa13.4□□□□□ -0.26
CTCFL-202ENST00000371196 SPATA31D1Q6ZQQ2 1576 aa13.4□□□□□ -0.26
CTCFL-202ENST00000371196 JCADQ9P266 1359 aa13.4□□□□□ -0.26
CTCFL-202ENST00000371196 EIF3JO75822 258 aaKnown RBP13.4□□□□□ -0.26
CTCFL-202ENST00000371196 EIF2S2P20042 333 aaKnown RBP13.4□□□□□ -0.26
CTCFL-202ENST00000371196 ISM2Q6H9L7 571 aa13.4□□□□□ -0.26
CTCFL-202ENST00000371196 EAF2Q96CJ1 260 aaPredicted RBP13.4□□□□□ -0.26
CTCFL-202ENST00000371196 ZSWIM4Q9H7M6 989 aa13.4□□□□□ -0.26
CTCFL-202ENST00000371196 RTEL1Q9NZ71 1219 aa13.4□□□□□ -0.26
CTCFL-202ENST00000371196 FAN1Q9Y2M0 1017 aa13.4□□□□□ -0.26
CTCFL-202ENST00000371196 N4BP1O75113 896 aaKnown RBP13.4□□□□□ -0.26
CTCFL-202ENST00000371196 NBPF6Q5VWK0 638 aa13.4□□□□□ -0.26
CTCFL-202ENST00000371196 NBPF4Q96M43 638 aa13.4□□□□□ -0.26
CTCFL-202ENST00000371196 AKAP12Q02952 1782 aa13.39□□□□□ -0.27
CTCFL-202ENST00000371196 HDGFP51858 240 aaKnown RBP13.39□□□□□ -0.27
CTCFL-202ENST00000371196 ZNF202O95125 648 aa13.39□□□□□ -0.27
CTCFL-202ENST00000371196 CHMP4BP1P59074 171 aa13.39□□□□□ -0.27
CTCFL-202ENST00000371196 PTPN21Q16825 1174 aa13.39□□□□□ -0.27
CTCFL-202ENST00000371196 SEC62Q99442 399 aaKnown RBP13.39□□□□□ -0.27
CTCFL-202ENST00000371196 BAG1Q99933 345 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-202ENST00000371196 ANKRD65E5RJM6 399 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 STK38Q15208 465 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 MSL3Q8N5Y2 521 aaKnown RBP13.38□□□□□ -0.27
CTCFL-202ENST00000371196 LINC00301Q8NCQ3 95 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 IL17REQ8NFR9 667 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 CCDC12Q8WUD4 166 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-202ENST00000371196 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-202ENST00000371196 KDRP35968 1356 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 TMEM232C9JQI7 657 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 PPFIA3O75145 1194 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 SART3Q15020 963 aaKnown RBP13.38□□□□□ -0.27
CTCFL-202ENST00000371196 LRRC31Q6UY01 552 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 TXNDC2Q86VQ3 553 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 GPATCH11Q8N954 259 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 EYA1Q99502 592 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 ANKZF1Q9H8Y5 726 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 L1RE1Q9UN81 338 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 AKAP2Q9Y2D5 859 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 SASH1O94885 1247 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 CCT2P78371 535 aaKnown RBP13.38□□□□□ -0.27
CTCFL-202ENST00000371196 SRGAP1Q7Z6B7 1085 aa13.38□□□□□ -0.27
CTCFL-202ENST00000371196 TLR7Q9NYK1 1049 aaKnown RBP13.38□□□□□ -0.27
CTCFL-202ENST00000371196 OVOS2A0A0J9YW53 1432 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 OVOS2Q6IE36 1432 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 ERLIN1O75477 346 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 USP5P45974 858 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 PSEN1P49768 467 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 TOGARAM2Q6ZUX3 1019 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 ABCC6O95255 1503 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 STX10O60499 249 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 CYP21A2P08686 494 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 MYL5Q02045 173 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 KCNG4Q8TDN1 519 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 C9orf78Q9NZ63 289 aaPredicted RBP13.37□□□□□ -0.27
CTCFL-202ENST00000371196 RAB21Q9UL25 225 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 CLIC4Q9Y696 253 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 SUGP1Q8IWZ8 645 aaKnown RBP13.37□□□□□ -0.27
CTCFL-202ENST00000371196 SUGCTQ9HAC7 445 aa13.37□□□□□ -0.27
CTCFL-202ENST00000371196 CUTAO60888 179 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 G3BP1Q13283 466 aaKnown RBP eCLIP13.36□□□□□ -0.27
CTCFL-202ENST00000371196 HSP90B2PQ58FF3 399 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 PDILTQ8N807 584 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 ABCB6Q9NP58 842 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 CHPF2Q9P2E5 772 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 LRRC37A3O60309 1634 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 COL15A1P39059 1388 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 PRR36Q9H6K5 1346 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 SPTLC2O15270 562 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 KARSQ15046 597 aaKnown RBP13.36□□□□□ -0.27
CTCFL-202ENST00000371196 E2F4Q16254 413 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 WWC2Q6AWC2 1192 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 PNKPQ96T60 521 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 NCOA5Q9HCD5 579 aaKnown RBP13.36□□□□□ -0.27
CTCFL-202ENST00000371196 PUF60Q9UHX1 559 aaKnown RBP13.36□□□□□ -0.27
CTCFL-202ENST00000371196 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
CTCFL-202ENST00000371196 PHACTR2O75167 634 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 CNNM3Q8NE01 707 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 FAM71BQ8TC56 605 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 HDAC5Q9UQL6 1122 aa13.36□□□□□ -0.27
CTCFL-202ENST00000371196 IGSF1Q8N6C5 1336 aa13.35□□□□□ -0.27
CTCFL-202ENST00000371196 SALL1Q9NSC2 1324 aa13.35□□□□□ -0.27
CTCFL-202ENST00000371196 MSANTD4Q8NCY6 345 aa13.35□□□□□ -0.27
CTCFL-202ENST00000371196 EDC3Q96F86 508 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms