RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 DACT2Q5SW24 774 aa19.02■□□□□ 0.64
PRPF38B-202ENST00000370022 RSBN1LQ6PCB5 846 aaPredicted RBP19.02■□□□□ 0.64
PRPF38B-202ENST00000370022 TBC1D22AQ8WUA7 517 aa19.02■□□□□ 0.64
PRPF38B-202ENST00000370022 CCDC136Q96JN2 1154 aa19.02■□□□□ 0.64
PRPF38B-202ENST00000370022 GJA3Q9Y6H8 435 aa19.02■□□□□ 0.64
PRPF38B-202ENST00000370022 DDNO94850 711 aaPredicted RBP19.02■□□□□ 0.63
PRPF38B-202ENST00000370022 CENPQQ7L2Z9 268 aaPredicted RBP19.02■□□□□ 0.63
PRPF38B-202ENST00000370022 ZNF784Q8NCA9 323 aaPredicted RBP19.02■□□□□ 0.63
PRPF38B-202ENST00000370022 AGBL3Q8NEM8 1001 aa19.02■□□□□ 0.63
PRPF38B-202ENST00000370022 WDR66Q8TBY9 1149 aa19.02■□□□□ 0.63
PRPF38B-202ENST00000370022 FBXW7Q969H0 707 aa19.02■□□□□ 0.63
PRPF38B-202ENST00000370022 GPATCH3Q96I76 525 aa19.02■□□□□ 0.63
PRPF38B-202ENST00000370022 L3MBTL3Q96JM7 780 aaPredicted RBP19.02■□□□□ 0.63
PRPF38B-202ENST00000370022 IQSEC3Q9UPP2 1182 aaPredicted RBP19.02■□□□□ 0.63
PRPF38B-202ENST00000370022 PSME4Q14997 1843 aa19.01■□□□□ 0.63
PRPF38B-202ENST00000370022 RASGRF1Q13972 1273 aa19.01■□□□□ 0.63
PRPF38B-202ENST00000370022 B4GALNT3Q6L9W6 998 aa19.01■□□□□ 0.63
PRPF38B-202ENST00000370022 CHD1LQ86WJ1 897 aa19.01■□□□□ 0.63
PRPF38B-202ENST00000370022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.01■□□□□ 0.63
PRPF38B-202ENST00000370022 DPF2Q92785 391 aa19.01■□□□□ 0.63
PRPF38B-202ENST00000370022 BCL11AQ9H165 835 aa19.01■□□□□ 0.63
PRPF38B-202ENST00000370022 PPP4R2Q9NY27 417 aa19.01■□□□□ 0.63
PRPF38B-202ENST00000370022 SCN9AQ15858 1988 aa19.01■□□□□ 0.63
PRPF38B-202ENST00000370022 MMP14P50281 582 aa19■□□□□ 0.63
PRPF38B-202ENST00000370022 CHAF1AQ13111 956 aaPredicted RBP18.99■□□□□ 0.63
PRPF38B-202ENST00000370022 MFSD14BQ5SR56 506 aa18.99■□□□□ 0.63
PRPF38B-202ENST00000370022 ZGPATQ8N5A5 531 aaKnown RBP18.99■□□□□ 0.63
PRPF38B-202ENST00000370022 SPATA5Q8NB90 893 aa18.99■□□□□ 0.63
PRPF38B-202ENST00000370022 SALL1Q9NSC2 1324 aa18.99■□□□□ 0.63
PRPF38B-202ENST00000370022 ECHDC1Q9NTX5 307 aa18.99■□□□□ 0.63
PRPF38B-202ENST00000370022 TTC41PQ6P2S7 1318 aa18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 MCAMP43121 646 aa18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 LNPKQ9C0E8 428 aa18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 HMG20BQ9P0W2 317 aa18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 SUGT1Q9Y2Z0 365 aa18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 COL1A1P02452 1464 aaPredicted RBP18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 IQCA1LA6NCM1 817 aa18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 ATP5JP18859 108 aa18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 LMOD1P29536 600 aaPredicted RBP18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 GMPSP49915 693 aaPredicted RBP18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 GMLQ99445 158 aa18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 ZBTB12Q9Y330 459 aaPredicted RBP18.98■□□□□ 0.63
PRPF38B-202ENST00000370022 WDR90Q96KV7 1748 aa18.97■□□□□ 0.63
PRPF38B-202ENST00000370022 MX1P20591 662 aa18.97■□□□□ 0.63
PRPF38B-202ENST00000370022 SCNN1DP51172 638 aa18.97■□□□□ 0.63
PRPF38B-202ENST00000370022 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
PRPF38B-202ENST00000370022 GPRC5DQ9NZD1 345 aa18.97■□□□□ 0.63
PRPF38B-202ENST00000370022 JAG2Q9Y219 1238 aa18.97■□□□□ 0.63
PRPF38B-202ENST00000370022 ZNF646O15015 1829 aaPredicted RBP18.96■□□□□ 0.63
PRPF38B-202ENST00000370022 MYH13Q9UKX3 1938 aa18.96■□□□□ 0.63
PRPF38B-202ENST00000370022 IGSF3O75054 1194 aa18.96■□□□□ 0.63
PRPF38B-202ENST00000370022 SCARF1Q14162 830 aa18.96■□□□□ 0.63
PRPF38B-202ENST00000370022 OGFOD1Q8N543 542 aa18.96■□□□□ 0.63
PRPF38B-202ENST00000370022 CERS5Q8N5B7 392 aa18.96■□□□□ 0.63
PRPF38B-202ENST00000370022 SALL3Q9BXA9 1300 aa18.95■□□□□ 0.62
PRPF38B-202ENST00000370022 ERC2O15083 957 aa18.95■□□□□ 0.62
PRPF38B-202ENST00000370022 USP17L8P0C7I0 530 aa18.95■□□□□ 0.62
PRPF38B-202ENST00000370022 SPTY2D1Q68D10 685 aaPredicted RBP18.95■□□□□ 0.62
PRPF38B-202ENST00000370022 MXD3Q9BW11 206 aa18.95■□□□□ 0.62
PRPF38B-202ENST00000370022 HACL1Q9UJ83 578 aa18.95■□□□□ 0.62
PRPF38B-202ENST00000370022 MAST3O60307 1309 aa18.94■□□□□ 0.62
PRPF38B-202ENST00000370022 H7C1D1 291 aa18.94■□□□□ 0.62
PRPF38B-202ENST00000370022 VEGFAP15692 232 aaPredicted RBP18.94■□□□□ 0.62
PRPF38B-202ENST00000370022 GPBP1L1Q9HC44 474 aaPredicted RBP18.94■□□□□ 0.62
PRPF38B-202ENST00000370022 STAP2Q9UGK3 403 aa18.94■□□□□ 0.62
PRPF38B-202ENST00000370022 CNOT7Q9UIV1 285 aaKnown RBP18.94■□□□□ 0.62
PRPF38B-202ENST00000370022 HDAC9Q9UKV0 1011 aa18.94■□□□□ 0.62
PRPF38B-202ENST00000370022 SCN4AP35499 1836 aa18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 PI16Q6UXB8 463 aa18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 KIAA0825Q8IV33 1275 aa18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 MICALL2Q8IY33 904 aa18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 ZNF526Q8TF50 670 aaPredicted RBP18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 LDHBP07195 334 aaKnown RBP18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 ZAP70P43403 619 aa18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 ZNF280AP59817 542 aaPredicted RBP18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 TTF1Q15361 905 aaPredicted RBP18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 OTUD7AQ8TE49 926 aaPredicted RBP18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 HAUS7Q99871 368 aa18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 SNRKQ9NRH2 765 aa18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 ADARB2Q9NS39 739 aaKnown RBP18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 ABCF2Q9UG63 623 aa18.93■□□□□ 0.62
PRPF38B-202ENST00000370022 AOX1Q06278 1338 aa18.92■□□□□ 0.62
PRPF38B-202ENST00000370022 POTECB2RU33 542 aa18.92■□□□□ 0.62
PRPF38B-202ENST00000370022 CYP2E1P05181 493 aaPredicted RBP18.92■□□□□ 0.62
PRPF38B-202ENST00000370022 PDE1AP54750 535 aa18.92■□□□□ 0.62
PRPF38B-202ENST00000370022 MRIQ9BWK5 157 aa18.92■□□□□ 0.62
PRPF38B-202ENST00000370022 BOLA2Q9H3K6 86 aa18.92■□□□□ 0.62
PRPF38B-202ENST00000370022 RRAGCQ9HB90 399 aa18.92■□□□□ 0.62
PRPF38B-202ENST00000370022 TTF2Q9UNY4 1162 aaKnown RBP18.92■□□□□ 0.62
PRPF38B-202ENST00000370022 AKAP11Q9UKA4 1901 aa18.91■□□□□ 0.62
PRPF38B-202ENST00000370022 EPHX2P34913 555 aa18.91■□□□□ 0.62
PRPF38B-202ENST00000370022 EPS15P42566 896 aa18.91■□□□□ 0.62
PRPF38B-202ENST00000370022 HDLBPQ00341 1268 aaKnown RBP18.91■□□□□ 0.62
PRPF38B-202ENST00000370022 ERICH6Q7L0X2 663 aa18.91■□□□□ 0.62
PRPF38B-202ENST00000370022 PNMA8AQ86V59 439 aaPredicted RBP18.91■□□□□ 0.62
PRPF38B-202ENST00000370022 PI4K2BQ8TCG2 481 aa18.91■□□□□ 0.62
PRPF38B-202ENST00000370022 OSBPL3Q9H4L5 887 aa18.91■□□□□ 0.62
PRPF38B-202ENST00000370022 PRDX5P30044 214 aa18.9■□□□□ 0.62
PRPF38B-202ENST00000370022 TMED8Q6PL24 325 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms