RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 FPGT-TNNI3KV9GXZ4 949 aa31.49■■■□□ 2.63
EFNA1-202ENST00000368407 SNAP23O00161 211 aa31.48■■■□□ 2.63
EFNA1-202ENST00000368407 PDE8BO95263 885 aa31.48■■■□□ 2.63
EFNA1-202ENST00000368407 KCNA3P22001 575 aa31.48■■■□□ 2.63
EFNA1-202ENST00000368407 RAD50Q92878 1312 aa31.48■■■□□ 2.63
EFNA1-202ENST00000368407 CCDC183Q5T5S1 534 aa31.47■■■□□ 2.63
EFNA1-202ENST00000368407 CCDC8Q9H0W5 538 aaPredicted RBP31.47■■■□□ 2.63
EFNA1-202ENST00000368407 TRIM6-TRIM34B2RNG4 842 aa31.47■■■□□ 2.63
EFNA1-202ENST00000368407 PPEF1O14829 653 aaPredicted RBP31.47■■■□□ 2.63
EFNA1-202ENST00000368407 PKNOX2Q96KN3 472 aa31.47■■■□□ 2.63
EFNA1-202ENST00000368407 TLR7Q9NYK1 1049 aaKnown RBP31.47■■■□□ 2.63
EFNA1-202ENST00000368407 TIMM10P62072 90 aa31.46■■■□□ 2.63
EFNA1-202ENST00000368407 WTIPA6NIX2 430 aaPredicted RBP31.45■■■□□ 2.63
EFNA1-202ENST00000368407 TGFB2P61812 414 aa31.45■■■□□ 2.63
EFNA1-202ENST00000368407 RILPL2Q969X0 211 aa31.45■■■□□ 2.63
EFNA1-202ENST00000368407 CD2APQ9Y5K6 639 aa31.45■■■□□ 2.63
EFNA1-202ENST00000368407 PRPF40BQ6NWY9 871 aaKnown RBP31.45■■■□□ 2.62
EFNA1-202ENST00000368407 OLFM4Q6UX06 510 aa31.45■■■□□ 2.62
EFNA1-202ENST00000368407 GPR108Q9NPR9 543 aa31.45■■■□□ 2.62
EFNA1-202ENST00000368407 ZNF609O15014 1411 aa31.44■■■□□ 2.62
EFNA1-202ENST00000368407 A0A1B0GUL7 405 aa31.44■■■□□ 2.62
EFNA1-202ENST00000368407 CNKSR1Q969H4 720 aa31.44■■■□□ 2.62
EFNA1-202ENST00000368407 ATP6V1DQ9Y5K8 247 aa31.44■■■□□ 2.62
EFNA1-202ENST00000368407 USP48Q86UV5 1035 aa31.43■■■□□ 2.62
EFNA1-202ENST00000368407 IFIT2P09913 472 aaKnown RBP31.43■■■□□ 2.62
EFNA1-202ENST00000368407 ATP2B3Q16720 1220 aa31.43■■■□□ 2.62
EFNA1-202ENST00000368407 TSHZ3Q63HK5 1081 aa31.43■■■□□ 2.62
EFNA1-202ENST00000368407 TTC14Q96N46 770 aa31.43■■■□□ 2.62
EFNA1-202ENST00000368407 NEUROD6Q96NK8 337 aa31.43■■■□□ 2.62
EFNA1-202ENST00000368407 KIAA1551Q9HCM1 1747 aa31.42■■■□□ 2.62
EFNA1-202ENST00000368407 CHAMP1Q96JM3 812 aa31.42■■■□□ 2.62
EFNA1-202ENST00000368407 PRIMPOLQ96LW4 560 aa31.42■■■□□ 2.62
EFNA1-202ENST00000368407 DBNLQ9UJU6 430 aaKnown RBP31.42■■■□□ 2.62
EFNA1-202ENST00000368407 AKAP2Q9Y2D5 859 aa31.42■■■□□ 2.62
EFNA1-202ENST00000368407 ATP6V0A2Q9Y487 856 aa31.42■■■□□ 2.62
EFNA1-202ENST00000368407 SGSM2O43147 1006 aa31.41■■■□□ 2.62
EFNA1-202ENST00000368407 PUM3Q15397 648 aaKnown RBP31.41■■■□□ 2.62
EFNA1-202ENST00000368407 DBNDD2Q9BQY9 259 aa31.41■■■□□ 2.62
EFNA1-202ENST00000368407 WWC3Q9ULE0 1092 aa31.41■■■□□ 2.62
EFNA1-202ENST00000368407 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.41■■■□□ 2.62
EFNA1-202ENST00000368407 PTMAP06454 111 aaKnown RBP31.41■■■□□ 2.62
EFNA1-202ENST00000368407 FGFR2P21802 821 aa31.41■■■□□ 2.62
EFNA1-202ENST00000368407 UBE2HP62256 183 aa31.41■■■□□ 2.62
EFNA1-202ENST00000368407 TMC4Q7Z404 712 aa31.41■■■□□ 2.62
EFNA1-202ENST00000368407 SP8Q8IXZ3 490 aa31.41■■■□□ 2.62
EFNA1-202ENST00000368407 TCHHQ07283 1943 aa31.4■■■□□ 2.62
EFNA1-202ENST00000368407 PDIA4P13667 645 aaKnown RBP31.4■■■□□ 2.62
EFNA1-202ENST00000368407 ADORA1P30542 326 aa31.4■■■□□ 2.62
EFNA1-202ENST00000368407 ANKRD2Q9GZV1 360 aa31.4■■■□□ 2.62
EFNA1-202ENST00000368407 ZNF219Q9P2Y4 722 aaPredicted RBP31.4■■■□□ 2.62
EFNA1-202ENST00000368407 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP31.4■■■□□ 2.62
EFNA1-202ENST00000368407 SLX4Q8IY92 1834 aa31.4■■■□□ 2.62
EFNA1-202ENST00000368407 ZSCAN22P10073 491 aaPredicted RBP31.39■■■□□ 2.62
EFNA1-202ENST00000368407 GPSM2P81274 684 aa31.39■■■□□ 2.62
EFNA1-202ENST00000368407 RNF214Q8ND24 703 aa31.39■■■□□ 2.62
EFNA1-202ENST00000368407 NLGN2Q8NFZ4 835 aa31.39■■■□□ 2.62
EFNA1-202ENST00000368407 PIBF1Q8WXW3 757 aa31.39■■■□□ 2.62
EFNA1-202ENST00000368407 ANKIB1Q9P2G1 1089 aa31.39■■■□□ 2.62
EFNA1-202ENST00000368407 DLEC1Q9Y238 1755 aa31.39■■■□□ 2.62
EFNA1-202ENST00000368407 FOXD4L5Q5VV16 416 aaPredicted RBP31.39■■■□□ 2.62
EFNA1-202ENST00000368407 TTLL6Q8N841 843 aa31.39■■■□□ 2.62
EFNA1-202ENST00000368407 FOXD4L4Q8WXT5 416 aaPredicted RBP31.39■■■□□ 2.62
EFNA1-202ENST00000368407 HMGN5P82970 282 aaKnown RBP31.38■■■□□ 2.61
EFNA1-202ENST00000368407 CACNA1SQ13698 1873 aa31.38■■■□□ 2.61
EFNA1-202ENST00000368407 A0A1B0GUL6 1792 aa31.38■■■□□ 2.61
EFNA1-202ENST00000368407 PI4K2BQ8TCG2 481 aa31.37■■■□□ 2.61
EFNA1-202ENST00000368407 LPIN2Q92539 896 aa31.37■■■□□ 2.61
EFNA1-202ENST00000368407 C7orf43Q8WVR3 580 aa31.37■■■□□ 2.61
EFNA1-202ENST00000368407 XAGE2Q96GT9 111 aa31.37■■■□□ 2.61
EFNA1-202ENST00000368407 FHDC1Q9C0D6 1143 aaPredicted RBP31.37■■■□□ 2.61
EFNA1-202ENST00000368407 XDHP47989 1333 aa31.36■■■□□ 2.61
EFNA1-202ENST00000368407 GADD45BO75293 160 aaPredicted RBP31.36■■■□□ 2.61
EFNA1-202ENST00000368407 MYRIPQ8NFW9 859 aa31.36■■■□□ 2.61
EFNA1-202ENST00000368407 UPF3BQ9BZI7 483 aaKnown RBP31.36■■■□□ 2.61
EFNA1-202ENST00000368407 PIM2Q9P1W9 311 aa31.36■■■□□ 2.61
EFNA1-202ENST00000368407 LIMCH1Q9UPQ0 1083 aa31.36■■■□□ 2.61
EFNA1-202ENST00000368407 CNTROBQ8N137 903 aa31.36■■■□□ 2.61
EFNA1-202ENST00000368407 LSG1Q9H089 658 aaKnown RBP31.36■■■□□ 2.61
EFNA1-202ENST00000368407 LRRC37AA6NMS7 1700 aa31.35■■■□□ 2.61
EFNA1-202ENST00000368407 GTF2F1P35269 517 aaKnown RBP eCLIP31.35■■■□□ 2.612e-7■■■■□ 25.7
EFNA1-202ENST00000368407 UBE4AQ14139 1066 aa31.35■■■□□ 2.61
EFNA1-202ENST00000368407 SNX14Q9Y5W7 946 aa31.35■■■□□ 2.61
EFNA1-202ENST00000368407 TTC41PQ6P2S7 1318 aa31.34■■■□□ 2.61
EFNA1-202ENST00000368407 TPM3P06753 285 aa31.34■■■□□ 2.61
EFNA1-202ENST00000368407 SLC5A1P13866 664 aa31.34■■■□□ 2.61
EFNA1-202ENST00000368407 KCNJ4P48050 445 aa31.34■■■□□ 2.61
EFNA1-202ENST00000368407 ZNF804BA4D1E1 1349 aa31.34■■■□□ 2.61
EFNA1-202ENST00000368407 KLRK1P26718 216 aa31.34■■■□□ 2.61
EFNA1-202ENST00000368407 SPTLC3Q9NUV7 552 aa31.34■■■□□ 2.61
EFNA1-202ENST00000368407 C21orf2O43822 256 aa31.33■■■□□ 2.61
EFNA1-202ENST00000368407 KCNB2Q92953 911 aa31.33■■■□□ 2.61
EFNA1-202ENST00000368407 ECHDC1Q9NTX5 307 aa31.33■■■□□ 2.61
EFNA1-202ENST00000368407 FAM13BQ9NYF5 915 aa31.33■■■□□ 2.61
EFNA1-202ENST00000368407 PODXL2Q9NZ53 605 aa31.33■■■□□ 2.61
EFNA1-202ENST00000368407 STX6O43752 255 aa31.32■■■□□ 2.6
EFNA1-202ENST00000368407 IFIT1P09914 478 aaKnown RBP31.32■■■□□ 2.6
EFNA1-202ENST00000368407 GPR101Q96P66 508 aaPredicted RBP31.32■■■□□ 2.6
EFNA1-202ENST00000368407 TM6SF1Q9BZW5 370 aa31.32■■■□□ 2.6
EFNA1-202ENST00000368407 ZSCAN31Q96LW9 406 aaPredicted RBP31.32■■■□□ 2.6
EFNA1-202ENST00000368407 POLLQ9UGP5 575 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms