RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 CENPHQ9H3R5 247 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 CXorf56Q9H5V9 222 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 ATG3Q9NT62 314 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 POGZQ7Z3K3 1410 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 MYL6BP14649 208 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 TDO2P48775 406 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 TADA2BQ86TJ2 420 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 GIMAP7Q8NHV1 300 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 AFAP1L1Q8TED9 768 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 FANCLQ9NW38 375 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 HMG20BQ9P0W2 317 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 TET3O43151 1660 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 ABCC1P33527 1531 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 RDXP35241 583 aaKnown RBP13.11□□□□□ -0.31
CNOT3-202ENST00000358389 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 RAI14Q9P0K7 980 aa13.11□□□□□ -0.31
CNOT3-202ENST00000358389 UHRF1BP1LA0JNW5 1464 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 MEX3CQ5U5Q3 659 aaKnown RBP13.1□□□□□ -0.31
CNOT3-202ENST00000358389 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CEP112Q8N8E3 955 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CTAGE15A4D2H0 777 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CTAGE8P0CG41 777 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 SYKP43405 635 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CCT5P48643 541 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CORO7P57737 925 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 ZNF530Q6P9A1 599 aaPredicted RBP13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CTAGE6Q86UF2 777 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CTAGE4Q8IX94 777 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 C8orf76Q96K31 380 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 EBAG9O00559 213 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 GIGYF1O75420 1035 aaPredicted RBP13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CCDC175P0C221 793 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CASP8Q14790 479 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 SRGAP1Q7Z6B7 1085 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 PPFIBP1Q86W92 1011 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 CRACR2AQ9BSW2 395 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 AKAP2Q9Y2D5 859 aa13.1□□□□□ -0.31
CNOT3-202ENST00000358389 PATL2C9JE40 543 aaKnown RBP13.09□□□□□ -0.31
CNOT3-202ENST00000358389 CCDC172P0C7W6 258 aa13.09□□□□□ -0.31
CNOT3-202ENST00000358389 ADALQ6DHV7 355 aa13.09□□□□□ -0.31
CNOT3-202ENST00000358389 RALYLQ86SE5 291 aaKnown RBP13.09□□□□□ -0.31
CNOT3-202ENST00000358389 FMR1NBQ8N0W7 255 aaPredicted RBP13.09□□□□□ -0.31
CNOT3-202ENST00000358389 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
CNOT3-202ENST00000358389 ABCC3O15438 1527 aa13.09□□□□□ -0.31
CNOT3-202ENST00000358389 LRRC31Q6UY01 552 aa13.09□□□□□ -0.31
CNOT3-202ENST00000358389 KCND1Q9NSA2 647 aa13.09□□□□□ -0.31
CNOT3-202ENST00000358389 DHX37Q8IY37 1157 aaKnown RBP13.09□□□□□ -0.31
CNOT3-202ENST00000358389 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
CNOT3-202ENST00000358389 CEP83Q9Y592 693 aa13.09□□□□□ -0.31
CNOT3-202ENST00000358389 USP32Q8NFA0 1604 aa13.09□□□□□ -0.31
CNOT3-202ENST00000358389 A0A087WUV0 522 aaPredicted RBP13.08□□□□□ -0.31
CNOT3-202ENST00000358389 FANCGO15287 622 aa13.08□□□□□ -0.31
CNOT3-202ENST00000358389 RNF40O75150 1001 aa13.08□□□□□ -0.31
CNOT3-202ENST00000358389 TRIM29Q14134 588 aa13.08□□□□□ -0.31
CNOT3-202ENST00000358389 NPATQ14207 1427 aa13.08□□□□□ -0.31
CNOT3-202ENST00000358389 HOOK1Q9UJC3 728 aaKnown RBP13.08□□□□□ -0.31
CNOT3-202ENST00000358389 NAA16Q6N069 864 aaPredicted RBP13.08□□□□□ -0.32
CNOT3-202ENST00000358389 FAM71BQ8TC56 605 aa13.08□□□□□ -0.32
CNOT3-202ENST00000358389 KCNG4Q8TDN1 519 aa13.08□□□□□ -0.32
CNOT3-202ENST00000358389 HINFPQ9BQA5 517 aa13.08□□□□□ -0.32
CNOT3-202ENST00000358389 ADGRB1O14514 1584 aa13.08□□□□□ -0.32
CNOT3-202ENST00000358389 PPFIA4O75335 1185 aa13.08□□□□□ -0.32
CNOT3-202ENST00000358389 TFRCP02786 760 aaKnown RBP13.08□□□□□ -0.32
CNOT3-202ENST00000358389 PNOCQ13519 176 aa13.08□□□□□ -0.32
CNOT3-202ENST00000358389 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
CNOT3-202ENST00000358389 FBXW10Q5XX13 1052 aa13.08□□□□□ -0.32
CNOT3-202ENST00000358389 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
CNOT3-202ENST00000358389 PNKPQ96T60 521 aa13.08□□□□□ -0.32
CNOT3-202ENST00000358389 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
CNOT3-202ENST00000358389 MTMR7Q9Y216 660 aa13.08□□□□□ -0.32
CNOT3-202ENST00000358389 CTAGE9A4FU28 777 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 KCNJ6P48051 423 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 POLA2Q14181 598 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 MTF1Q14872 753 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 KLHL10Q6JEL2 608 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 KLHDC4Q8TBB5 520 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 CCDC85AQ96PX6 553 aaPredicted RBP13.07□□□□□ -0.32
CNOT3-202ENST00000358389 FAM107BQ9H098 131 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 CHPF2Q9P2E5 772 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 SHTN1A0MZ66 631 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 KIAA0754O94854 1291 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
CNOT3-202ENST00000358389 VSTM4Q8IW00 320 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 EAF2Q96CJ1 260 aaPredicted RBP13.07□□□□□ -0.32
CNOT3-202ENST00000358389 SETBP1Q9Y6X0 1596 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 GNAT3A8MTJ3 354 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 PFKFB1P16118 471 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 VSNL1P62760 191 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 BEND6Q5SZJ8 279 aaPredicted RBP13.07□□□□□ -0.32
CNOT3-202ENST00000358389 TTC19Q6DKK2 380 aaPredicted RBP13.07□□□□□ -0.32
CNOT3-202ENST00000358389 RSRC2Q7L4I2 434 aaKnown RBP13.07□□□□□ -0.32
CNOT3-202ENST00000358389 TRMT44Q8IYL2 757 aaKnown RBP13.07□□□□□ -0.32
CNOT3-202ENST00000358389 UBXN6Q9BZV1 441 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 GBP6Q6ZN66 633 aa13.07□□□□□ -0.32
CNOT3-202ENST00000358389 GLI2P10070 1586 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms