RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 TAF1P21675 1872 aa18.4■□□□□ 0.54
MBD1-205ENST00000353909 RREB1Q92766 1687 aa18.39■□□□□ 0.54
MBD1-205ENST00000353909 NSUN7Q8NE18 718 aaKnown RBP18.39■□□□□ 0.53
MBD1-205ENST00000353909 SMARCC1Q92922 1105 aaPredicted RBP18.39■□□□□ 0.53
MBD1-205ENST00000353909 AK7Q96M32 723 aa18.39■□□□□ 0.53
MBD1-205ENST00000353909 NBPF3Q9H094 633 aa18.39■□□□□ 0.53
MBD1-205ENST00000353909 PDE6AP16499 860 aa18.38■□□□□ 0.53
MBD1-205ENST00000353909 BCAMP50895 628 aa18.38■□□□□ 0.53
MBD1-205ENST00000353909 IMMTQ16891 758 aaKnown RBP18.38■□□□□ 0.53
MBD1-205ENST00000353909 RAB11FIP4Q86YS3 637 aa18.38■□□□□ 0.53
MBD1-205ENST00000353909 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.38■□□□□ 0.536e-7■■■■□ 23.3
MBD1-205ENST00000353909 PDIA3P30101 505 aaKnown RBP18.38■□□□□ 0.53
MBD1-205ENST00000353909 ERFEQ4G0M1 354 aa18.38■□□□□ 0.53
MBD1-205ENST00000353909 CCDC152Q4G0S7 254 aa18.38■□□□□ 0.53
MBD1-205ENST00000353909 SPATA5Q8NB90 893 aa18.37■□□□□ 0.53
MBD1-205ENST00000353909 SMARCC2Q8TAQ2 1214 aa18.37■□□□□ 0.53
MBD1-205ENST00000353909 VPS72Q15906 364 aa18.37■□□□□ 0.53
MBD1-205ENST00000353909 CTNNA3Q9UI47 895 aa18.37■□□□□ 0.53
MBD1-205ENST00000353909 IQSEC3Q9UPP2 1182 aaPredicted RBP18.37■□□□□ 0.53
MBD1-205ENST00000353909 COL5A3P25940 1745 aaPredicted RBP18.37■□□□□ 0.53
MBD1-205ENST00000353909 TCRBV5S4A2TA0A5A2 114 aa18.36■□□□□ 0.53
MBD1-205ENST00000353909 ANTXR2P58335 489 aa18.36■□□□□ 0.53
MBD1-205ENST00000353909 PTPDC1A2A3K4 754 aa18.36■□□□□ 0.53
MBD1-205ENST00000353909 SLC5A1P13866 664 aa18.36■□□□□ 0.53
MBD1-205ENST00000353909 AMIGO3Q86WK7 504 aa18.36■□□□□ 0.53
MBD1-205ENST00000353909 SYAP1Q96A49 352 aaPredicted RBP18.36■□□□□ 0.53
MBD1-205ENST00000353909 APPP05067 770 aa18.36■□□□□ 0.53
MBD1-205ENST00000353909 KRT85P78386 507 aa18.36■□□□□ 0.53
MBD1-205ENST00000353909 CHRNDQ07001 517 aa18.36■□□□□ 0.53
MBD1-205ENST00000353909 TTF1Q15361 905 aaPredicted RBP18.36■□□□□ 0.53
MBD1-205ENST00000353909 MB21D2Q8IYB1 491 aaPredicted RBP18.36■□□□□ 0.53
MBD1-205ENST00000353909 PPP1R9BQ96SB3 815 aa18.36■□□□□ 0.53
MBD1-205ENST00000353909 INCENPQ9NQS7 918 aa18.36■□□□□ 0.53
MBD1-205ENST00000353909 ZNF213O14771 459 aa18.35■□□□□ 0.53
MBD1-205ENST00000353909 UQCRFS1P1P0C7P4 283 aa18.35■□□□□ 0.53
MBD1-205ENST00000353909 IGHMBP2P38935 993 aaKnown RBP18.35■□□□□ 0.53
MBD1-205ENST00000353909 CCDC24Q8N4L8 307 aa18.35■□□□□ 0.53
MBD1-205ENST00000353909 FAM184AQ8NB25 1140 aa18.35■□□□□ 0.53
MBD1-205ENST00000353909 PRC1O43663 620 aa18.35■□□□□ 0.53
MBD1-205ENST00000353909 UBE3CQ15386 1083 aa18.35■□□□□ 0.53
MBD1-205ENST00000353909 TBC1D10CQ8IV04 446 aa18.35■□□□□ 0.53
MBD1-205ENST00000353909 MAGEB6Q8N7X4 407 aa18.35■□□□□ 0.53
MBD1-205ENST00000353909 BCL2L12Q9HB09 334 aa18.35■□□□□ 0.53
MBD1-205ENST00000353909 SRP68Q9UHB9 627 aaKnown RBP18.35■□□□□ 0.53
MBD1-205ENST00000353909 RESTQ13127 1097 aa18.34■□□□□ 0.53
MBD1-205ENST00000353909 CCDC183Q5T5S1 534 aa18.34■□□□□ 0.53
MBD1-205ENST00000353909 TBC1D9BQ66K14 1250 aa18.34■□□□□ 0.53
MBD1-205ENST00000353909 TSPY26PQ9H489 355 aa18.34■□□□□ 0.53
MBD1-205ENST00000353909 H3BQV1 296 aa18.34■□□□□ 0.53
MBD1-205ENST00000353909 CCDC173Q0VFZ6 552 aa18.34■□□□□ 0.53
MBD1-205ENST00000353909 IFFO2Q5TF58 517 aa18.34■□□□□ 0.53
MBD1-205ENST00000353909 ZSCAN25Q6NSZ9 544 aa18.34■□□□□ 0.53
MBD1-205ENST00000353909 GIMAP6Q6P9H5 292 aa18.34■□□□□ 0.53
MBD1-205ENST00000353909 GUCY1B3Q02153 619 aa18.33■□□□□ 0.53
MBD1-205ENST00000353909 ZNF652Q9Y2D9 606 aa18.33■□□□□ 0.53
MBD1-205ENST00000353909 CICQ96RK0 1608 aaPredicted RBP18.33■□□□□ 0.52
MBD1-205ENST00000353909 STRBPQ96SI9 672 aaKnown RBP18.33■□□□□ 0.52
MBD1-205ENST00000353909 FDPSP14324 419 aaKnown RBP18.32■□□□□ 0.52
MBD1-205ENST00000353909 LIG1P18858 919 aa18.32■□□□□ 0.52
MBD1-205ENST00000353909 TRIM44Q96DX7 344 aaPredicted RBP18.32■□□□□ 0.52
MBD1-205ENST00000353909 ZNF274Q96GC6 653 aaPredicted RBP18.32■□□□□ 0.52
MBD1-205ENST00000353909 LLPHQ9BRT6 129 aaKnown RBP18.32■□□□□ 0.52
MBD1-205ENST00000353909 FTOQ9C0B1 505 aaKnown RBP eCLIP18.32■□□□□ 0.52
MBD1-205ENST00000353909 SALL1Q9NSC2 1324 aa18.32■□□□□ 0.52
MBD1-205ENST00000353909 ATRNO75882 1429 aa18.32■□□□□ 0.52
MBD1-205ENST00000353909 ARAP2Q8WZ64 1704 aa18.32■□□□□ 0.52
MBD1-205ENST00000353909 MCM5P33992 734 aa18.32■□□□□ 0.52
MBD1-205ENST00000353909 CLEC4GQ6UXB4 293 aa18.32■□□□□ 0.52
MBD1-205ENST00000353909 FNBP4Q8N3X1 1017 aaPredicted RBP18.32■□□□□ 0.52
MBD1-205ENST00000353909 NCOA7Q8NI08 942 aa18.32■□□□□ 0.52
MBD1-205ENST00000353909 USP21Q9UK80 565 aa18.32■□□□□ 0.52
MBD1-205ENST00000353909 CEBPZQ03701 1054 aaKnown RBP18.31■□□□□ 0.52
MBD1-205ENST00000353909 LEO1Q8WVC0 666 aaPredicted RBP18.31■□□□□ 0.52
MBD1-205ENST00000353909 ANP32BQ92688 251 aaKnown RBP18.31■□□□□ 0.52
MBD1-205ENST00000353909 AIDAQ96BJ3 306 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 SPATA32Q96LK8 384 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 ARMT1Q9H993 441 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 EPB41L4AQ9HCS5 686 aaPredicted RBP18.31■□□□□ 0.52
MBD1-205ENST00000353909 HPS5Q9UPZ3 1129 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 KLF18A0A0U1RQI7 1052 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 PRKAB2O43741 272 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 MBD4O95243 580 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 GYG1P46976 350 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 EVCP57679 992 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 CYB5R4Q7L1T6 521 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 RALYLQ86SE5 291 aaKnown RBP18.31■□□□□ 0.52
MBD1-205ENST00000353909 SENP2Q9HC62 589 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 BCORQ6W2J9 1755 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 PDIA4P13667 645 aaKnown RBP18.31■□□□□ 0.52
MBD1-205ENST00000353909 GJB4Q9NTQ9 266 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 RTL9Q8NET4 1388 aa18.31■□□□□ 0.52
MBD1-205ENST00000353909 PHF14O94880 888 aa18.3■□□□□ 0.52
MBD1-205ENST00000353909 CSPP1Q1MSJ5 1256 aa18.3■□□□□ 0.52
MBD1-205ENST00000353909 OTUD7BQ6GQQ9 843 aa18.3■□□□□ 0.52
MBD1-205ENST00000353909 FBXL16Q8N461 479 aa18.3■□□□□ 0.52
MBD1-205ENST00000353909 CELF1Q92879 486 aaKnown RBP18.3■□□□□ 0.52
MBD1-205ENST00000353909 PGBD1Q96JS3 809 aa18.3■□□□□ 0.52
MBD1-205ENST00000353909 TACC3Q9Y6A5 838 aa18.3■□□□□ 0.52
MBD1-205ENST00000353909 ESPNB1AK53 854 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms