RNA–Protein interactions for RNA: ENST00000349157.10

PUF60-202, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUF60, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-202ENST00000349157 PDE6AP16499 860 aa23.11■■□□□ 1.29
PUF60-202ENST00000349157 NCLP19338 710 aaKnown RBP23.11■■□□□ 1.29
PUF60-202ENST00000349157 HELBQ8NG08 1087 aaPredicted RBP23.11■■□□□ 1.29
PUF60-202ENST00000349157 ARHGEF1Q92888 912 aaKnown RBP23.11■■□□□ 1.29
PUF60-202ENST00000349157 GTF3C6Q969F1 213 aa23.11■■□□□ 1.29
PUF60-202ENST00000349157 QTRT2Q9H974 415 aaKnown RBP23.11■■□□□ 1.29
PUF60-202ENST00000349157 ZNF804BA4D1E1 1349 aa23.11■■□□□ 1.29
PUF60-202ENST00000349157 PDS5AQ29RF7 1337 aaKnown RBP23.11■■□□□ 1.29
PUF60-202ENST00000349157 F13A1P00488 732 aa23.1■■□□□ 1.29
PUF60-202ENST00000349157 CAVIN4Q5BKX8 364 aa23.1■■□□□ 1.29
PUF60-202ENST00000349157 ZNF274Q96GC6 653 aaPredicted RBP23.1■■□□□ 1.29
PUF60-202ENST00000349157 PUS7LQ9H0K6 701 aaKnown RBP23.1■■□□□ 1.29
PUF60-202ENST00000349157 PIH1D3Q9NQM4 214 aaKnown RBP23.1■■□□□ 1.29
PUF60-202ENST00000349157 CARMIL3Q8ND23 1372 aa23.1■■□□□ 1.29
PUF60-202ENST00000349157 ZNF213O14771 459 aa23.1■■□□□ 1.29
PUF60-202ENST00000349157 FGAP02671 866 aa23.1■■□□□ 1.29
PUF60-202ENST00000349157 RASGRF1Q13972 1273 aa23.1■■□□□ 1.29
PUF60-202ENST00000349157 PTF1AQ7RTS3 328 aa23.1■■□□□ 1.29
PUF60-202ENST00000349157 TAF6LQ9Y6J9 622 aa23.1■■□□□ 1.29
PUF60-202ENST00000349157 PFKFB2O60825 505 aa23.09■■□□□ 1.29
PUF60-202ENST00000349157 PRPF40AO75400 957 aaKnown RBP23.09■■□□□ 1.29
PUF60-202ENST00000349157 PI16Q6UXB8 463 aa23.09■■□□□ 1.29
PUF60-202ENST00000349157 STOX1Q6ZVD7 989 aa23.09■■□□□ 1.29
PUF60-202ENST00000349157 ILDR2Q71H61 639 aa23.09■■□□□ 1.29
PUF60-202ENST00000349157 NCOA7Q8NI08 942 aa23.09■■□□□ 1.29
PUF60-202ENST00000349157 ZNF532Q9HCE3 1301 aa23.09■■□□□ 1.29
PUF60-202ENST00000349157 TCRBV5S4A2TA0A5A2 114 aa23.08■■□□□ 1.29
PUF60-202ENST00000349157 MRE11P49959 708 aa23.08■■□□□ 1.29
PUF60-202ENST00000349157 EVCP57679 992 aa23.08■■□□□ 1.29
PUF60-202ENST00000349157 RPS8P62241 208 aaKnown RBP23.08■■□□□ 1.29
PUF60-202ENST00000349157 HMGN5P82970 282 aaKnown RBP23.08■■□□□ 1.29
PUF60-202ENST00000349157 AIDAQ96BJ3 306 aa23.08■■□□□ 1.29
PUF60-202ENST00000349157 MCM5P33992 734 aa23.08■■□□□ 1.28
PUF60-202ENST00000349157 LARP1BQ659C4 914 aaKnown RBP23.08■■□□□ 1.28
PUF60-202ENST00000349157 BICDL1Q6ZP65 573 aa23.08■■□□□ 1.28
PUF60-202ENST00000349157 SYAP1Q96A49 352 aaPredicted RBP23.08■■□□□ 1.28
PUF60-202ENST00000349157 ST3GAL1Q11201 340 aa23.07■■□□□ 1.28
PUF60-202ENST00000349157 TRDNQ13061 729 aa23.07■■□□□ 1.28
PUF60-202ENST00000349157 RALYLQ86SE5 291 aaKnown RBP23.07■■□□□ 1.28
PUF60-202ENST00000349157 GZF1Q9H116 711 aaPredicted RBP23.07■■□□□ 1.28
PUF60-202ENST00000349157 DENND2AQ9ULE3 1009 aa23.07■■□□□ 1.28
PUF60-202ENST00000349157 MINPP1Q9UNW1 487 aa23.07■■□□□ 1.28
PUF60-202ENST00000349157 PNPLA7Q6ZV29 1317 aa23.07■■□□□ 1.28
PUF60-202ENST00000349157 RGS22Q8NE09 1264 aa23.06■■□□□ 1.28
PUF60-202ENST00000349157 LARP6Q9BRS8 491 aaKnown RBP23.06■■□□□ 1.28
PUF60-202ENST00000349157 SRP68Q9UHB9 627 aaKnown RBP23.06■■□□□ 1.28
PUF60-202ENST00000349157 MTMR6Q9Y217 621 aa23.06■■□□□ 1.28
PUF60-202ENST00000349157 LAMA4Q16363 1823 aa23.06■■□□□ 1.28
PUF60-202ENST00000349157 KCNQ4P56696 695 aa23.05■■□□□ 1.28
PUF60-202ENST00000349157 NECAB1Q8N987 351 aa23.05■■□□□ 1.28
PUF60-202ENST00000349157 BRF1Q92994 677 aa23.05■■□□□ 1.28
PUF60-202ENST00000349157 STRBPQ96SI9 672 aaKnown RBP23.05■■□□□ 1.28
PUF60-202ENST00000349157 A0A1B0GUL6 1792 aa23.05■■□□□ 1.28
PUF60-202ENST00000349157 C4AP0C0L4 1744 aa23.05■■□□□ 1.28
PUF60-202ENST00000349157 PATL2C9JE40 543 aaKnown RBP23.05■■□□□ 1.28
PUF60-202ENST00000349157 FOXP2O15409 715 aa23.05■■□□□ 1.28
PUF60-202ENST00000349157 SLFNL1Q499Z3 407 aa23.05■■□□□ 1.28
PUF60-202ENST00000349157 KRT27Q7Z3Y8 459 aa23.05■■□□□ 1.28
PUF60-202ENST00000349157 NACAP1Q9BZK3 213 aa23.05■■□□□ 1.28
PUF60-202ENST00000349157 DHX16O60231 1041 aaKnown RBP23.04■■□□□ 1.28
PUF60-202ENST00000349157 ZNF445P59923 1031 aa23.04■■□□□ 1.28
PUF60-202ENST00000349157 CASZ1Q86V15 1759 aa23.04■■□□□ 1.28
PUF60-202ENST00000349157 BCAMP50895 628 aa23.03■■□□□ 1.28
PUF60-202ENST00000349157 SMARCC2Q8TAQ2 1214 aa23.03■■□□□ 1.28
PUF60-202ENST00000349157 TCEANC2Q96MN5 208 aa23.03■■□□□ 1.28
PUF60-202ENST00000349157 VPS37DQ86XT2 251 aa23.03■■□□□ 1.28
PUF60-202ENST00000349157 WWC3Q9ULE0 1092 aa23.03■■□□□ 1.28
PUF60-202ENST00000349157 NPHP1O15259 732 aa23.02■■□□□ 1.28
PUF60-202ENST00000349157 MB21D2Q8IYB1 491 aaPredicted RBP23.02■■□□□ 1.28
PUF60-202ENST00000349157 MAGEB6Q8N7X4 407 aa23.02■■□□□ 1.28
PUF60-202ENST00000349157 MTA3Q9BTC8 594 aa23.02■■□□□ 1.28
PUF60-202ENST00000349157 LRP2BPQ9P2M1 347 aa23.02■■□□□ 1.28
PUF60-202ENST00000349157 FAM182BQ5T319 152 aa23.01■■□□□ 1.27
PUF60-202ENST00000349157 FOXD4L5Q5VV16 416 aaPredicted RBP23.01■■□□□ 1.27
PUF60-202ENST00000349157 C3orf67Q6ZVT6 689 aa23.01■■□□□ 1.27
PUF60-202ENST00000349157 FOXD4L4Q8WXT5 416 aaPredicted RBP23.01■■□□□ 1.27
PUF60-202ENST00000349157 CNNM2Q9H8M5 875 aa23.01■■□□□ 1.27
PUF60-202ENST00000349157 PHF14O94880 888 aa23.01■■□□□ 1.27
PUF60-202ENST00000349157 TTLL5Q6EMB2 1281 aa23.01■■□□□ 1.27
PUF60-202ENST00000349157 FBXO33Q7Z6M2 555 aa23.01■■□□□ 1.27
PUF60-202ENST00000349157 CELF1Q92879 486 aaKnown RBP23.01■■□□□ 1.27
PUF60-202ENST00000349157 ZSCAN16Q9H4T2 348 aaPredicted RBP23.01■■□□□ 1.27
PUF60-202ENST00000349157 APPP05067 770 aa23■■□□□ 1.27
PUF60-202ENST00000349157 ZNF772Q68DY9 489 aaPredicted RBP23■■□□□ 1.27
PUF60-202ENST00000349157 CNBD1Q8NA66 436 aa23■■□□□ 1.27
PUF60-202ENST00000349157 FAM184AQ8NB25 1140 aa23■■□□□ 1.27
PUF60-202ENST00000349157 TMEM87BQ96K49 555 aa22.99■■□□□ 1.27
PUF60-202ENST00000349157 VPS37CA5D8V6 355 aaPredicted RBP22.98■■□□□ 1.27
PUF60-202ENST00000349157 PRC1O43663 620 aa22.98■■□□□ 1.27
PUF60-202ENST00000349157 UBE2HP62256 183 aa22.98■■□□□ 1.27
PUF60-202ENST00000349157 SCRN1Q12765 414 aa22.98■■□□□ 1.27
PUF60-202ENST00000349157 NFIXQ14938 502 aa22.98■■□□□ 1.27
PUF60-202ENST00000349157 NAPBQ9H115 298 aa22.98■■□□□ 1.27
PUF60-202ENST00000349157 LEMD3Q9Y2U8 911 aa22.98■■□□□ 1.27
PUF60-202ENST00000349157 UBR3Q6ZT12 1888 aa22.98■■□□□ 1.27
PUF60-202ENST00000349157 PDIA3P30101 505 aaKnown RBP22.98■■□□□ 1.27
PUF60-202ENST00000349157 KRT85P78386 507 aa22.98■■□□□ 1.27
PUF60-202ENST00000349157 STK3Q13188 491 aa22.98■■□□□ 1.27
PUF60-202ENST00000349157 GRAPQ13588 217 aa22.98■■□□□ 1.27
PUF60-202ENST00000349157 NAA16Q6N069 864 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms