RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 TPTE2Q6XPS3 522 aa13.34□□□□□ -0.27
TRAF3-201ENST00000347662 GNL1P36915 607 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-201ENST00000347662 PTPRCP08575 1304 aa13.34□□□□□ -0.27
TRAF3-201ENST00000347662 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
TRAF3-201ENST00000347662 UBA7P41226 1012 aa13.33□□□□□ -0.27
TRAF3-201ENST00000347662 JDP2Q8WYK2 163 aa13.33□□□□□ -0.27
TRAF3-201ENST00000347662 CIB2O75838 187 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 TRIM47Q96LD4 638 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 PIK3R4Q99570 1358 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 CALM1P0DP23 149 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 CALM2P0DP24 149 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 CALM3P0DP25 149 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 AKAP4Q5JQC9 854 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 STMN4Q9H169 189 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-201ENST00000347662 GJA3Q9Y6H8 435 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 ALDH3A1P30838 453 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 LMBR1LQ6UX01 489 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 AGTPBP1Q9UPW5 1226 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 NOD1Q9Y239 953 aa13.33□□□□□ -0.28
TRAF3-201ENST00000347662 MGEA5O60502 916 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 ARID4AP29374 1257 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-201ENST00000347662 STMN2Q93045 179 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 CEP85LQ5SZL2 805 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 ABCC10Q5T3U5 1492 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 USP21Q9UK80 565 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 DAPK3O43293 454 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 PTGS1P23219 599 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 CCDC24Q8N4L8 307 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 RAB3IPQ96QF0 476 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-201ENST00000347662 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 RABGAP1Q9Y3P9 1069 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 RPRD2Q5VT52 1461 aaKnown RBP13.32□□□□□ -0.28
TRAF3-201ENST00000347662 LPXNO60711 386 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 SP4Q02446 784 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 BICDL2A1A5D9 508 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 KIF5BP33176 963 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 HDAC9Q9UKV0 1011 aa13.32□□□□□ -0.28
TRAF3-201ENST00000347662 PDCD7Q8N8D1 485 aaKnown RBP13.31□□□□□ -0.28
TRAF3-201ENST00000347662 MRRFQ96E11 262 aaKnown RBP13.31□□□□□ -0.28
TRAF3-201ENST00000347662 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.31□□□□□ -0.283e-7■■■□□ 14.7
TRAF3-201ENST00000347662 PPP1R7Q15435 360 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 MTHFSDQ2M296 383 aaKnown RBP13.31□□□□□ -0.28
TRAF3-201ENST00000347662 TRAPPC3LQ5T215 181 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 TTC14Q96N46 770 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 RNF41Q9H4P4 317 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-201ENST00000347662 CCNL1Q9UK58 526 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-201ENST00000347662 MICU3Q86XE3 530 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 GTF3C6Q969F1 213 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 TRIM6Q9C030 488 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-201ENST00000347662 NKTRP30414 1462 aaKnown RBP13.31□□□□□ -0.28
TRAF3-201ENST00000347662 CYP7A1P22680 504 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 AKR1B10O60218 316 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 INPP1P49441 399 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 RSPH14Q9UHP6 348 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 PDE4BQ07343 736 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 CCDC129Q6ZRS4 1044 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 ERMNQ8TAM6 284 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 ZNF408Q9H9D4 720 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 SLAIN2Q9P270 581 aa13.31□□□□□ -0.28
TRAF3-201ENST00000347662 SDCCAG8Q86SQ7 713 aaPredicted RBP13.3□□□□□ -0.28
TRAF3-201ENST00000347662 FSIP1Q8NA03 581 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 ECHDC1Q9NTX5 307 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 POLKQ9UBT6 870 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 ANKRD36BQ8N2N9 1353 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 TMEM67Q5HYA8 995 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 CCDC121Q6ZUS5 278 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 RBM28Q9NW13 759 aaKnown RBP13.3□□□□□ -0.28
TRAF3-201ENST00000347662 ERCC6LQ2NKX8 1250 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 GRM8O00222 908 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 FMNL3Q8IVF7 1028 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 MSANTD4Q8NCY6 345 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 MEIS3Q99687 375 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAF3-201ENST00000347662 STK32BQ9NY57 414 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 NYXQ9GZU5 481 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 SNW1Q13573 536 aaKnown RBP13.3□□□□□ -0.28
TRAF3-201ENST00000347662 NSD2O96028 1365 aa13.3□□□□□ -0.28
TRAF3-201ENST00000347662 KRT24Q2M2I5 525 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 KRT9P35527 623 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 SH2D4BQ5SQS7 431 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 MICALL1Q8N3F8 863 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 EYA1Q99502 592 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 LRRC27Q9C0I9 530 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 PRPHP41219 470 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 MFSD6Q6ZSS7 791 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 CRNKL1Q9BZJ0 848 aaKnown RBP13.29□□□□□ -0.28
TRAF3-201ENST00000347662 STMN1P16949 149 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 CDR2Q01850 454 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 CCDC183Q5T5S1 534 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 APBA3O96018 575 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 GKAP1Q5VSY0 366 aaPredicted RBP13.29□□□□□ -0.28
TRAF3-201ENST00000347662 BAG1Q99933 345 aaPredicted RBP13.29□□□□□ -0.28
TRAF3-201ENST00000347662 TTLL3Q9Y4R7 772 aa13.29□□□□□ -0.28
TRAF3-201ENST00000347662 BEGAINQ9BUH8 593 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 ATP6V0A2Q9Y487 856 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 KRT5P13647 590 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 STAT6P42226 847 aa13.28□□□□□ -0.28
TRAF3-201ENST00000347662 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
TRAF3-201ENST00000347662 INF2Q27J81 1249 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms