RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 SLC5A1P13866 664 aa18.35■□□□□ 0.53
MBD1-203ENST00000339998 PDE6AP16499 860 aa18.35■□□□□ 0.53
MBD1-203ENST00000339998 DNM1Q05193 864 aaKnown RBP18.35■□□□□ 0.53
MBD1-203ENST00000339998 SPATA31A6Q5VVP1 1343 aa18.35■□□□□ 0.53
MBD1-203ENST00000339998 KLRK1P26718 216 aa18.35■□□□□ 0.53
MBD1-203ENST00000339998 SCRN1Q12765 414 aa18.35■□□□□ 0.53
MBD1-203ENST00000339998 MAGEB6Q8N7X4 407 aa18.34■□□□□ 0.53
MBD1-203ENST00000339998 ZPR1O75312 459 aa18.34■□□□□ 0.53
MBD1-203ENST00000339998 RPS6KA4O75676 772 aa18.34■□□□□ 0.53
MBD1-203ENST00000339998 ARID4AP29374 1257 aaPredicted RBP18.34■□□□□ 0.53
MBD1-203ENST00000339998 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
MBD1-203ENST00000339998 CLEC4GQ6UXB4 293 aa18.34■□□□□ 0.53
MBD1-203ENST00000339998 DHX32Q7L7V1 743 aaKnown RBP18.34■□□□□ 0.53
MBD1-203ENST00000339998 TAOK2Q9UL54 1235 aa18.34■□□□□ 0.53
MBD1-203ENST00000339998 FAM196AQ6ZSG2 479 aa18.33■□□□□ 0.53
MBD1-203ENST00000339998 NBPF5PQ86XG9 351 aaPredicted RBP18.33■□□□□ 0.53
MBD1-203ENST00000339998 GRPEL1Q9HAV7 217 aa18.33■□□□□ 0.53
MBD1-203ENST00000339998 RREB1Q92766 1687 aa18.33■□□□□ 0.53
MBD1-203ENST00000339998 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.53
MBD1-203ENST00000339998 SETDB2Q96T68 719 aa18.33■□□□□ 0.52
MBD1-203ENST00000339998 NARFQ9UHQ1 456 aa18.33■□□□□ 0.52
MBD1-203ENST00000339998 RTCBQ9Y3I0 505 aaKnown RBP18.33■□□□□ 0.52
MBD1-203ENST00000339998 ANKRD1Q15327 319 aa18.33■□□□□ 0.52
MBD1-203ENST00000339998 MIGA1Q8NAN2 632 aa18.33■□□□□ 0.52
MBD1-203ENST00000339998 AK7Q96M32 723 aa18.33■□□□□ 0.52
MBD1-203ENST00000339998 JAG2Q9Y219 1238 aa18.33■□□□□ 0.52
MBD1-203ENST00000339998 PRKAB2O43741 272 aa18.32■□□□□ 0.52
MBD1-203ENST00000339998 EXOSC10Q01780 885 aaKnown RBP18.32■□□□□ 0.52
MBD1-203ENST00000339998 GTF3C6Q969F1 213 aa18.32■□□□□ 0.52
MBD1-203ENST00000339998 NBPF3Q9H094 633 aa18.32■□□□□ 0.52
MBD1-203ENST00000339998 ZFYP08048 801 aaPredicted RBP18.32■□□□□ 0.52
MBD1-203ENST00000339998 ANKRD18AQ8IVF6 992 aa18.32■□□□□ 0.52
MBD1-203ENST00000339998 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.32■□□□□ 0.526e-7■■■■□ 23.3
MBD1-203ENST00000339998 ARMT1Q9H993 441 aa18.32■□□□□ 0.52
MBD1-203ENST00000339998 ABCF2Q9UG63 623 aa18.32■□□□□ 0.52
MBD1-203ENST00000339998 SYCE3A1L190 88 aa18.31■□□□□ 0.52
MBD1-203ENST00000339998 QTRT2Q9H974 415 aaKnown RBP18.31■□□□□ 0.52
MBD1-203ENST00000339998 TCRBV5S4A2TA0A5A2 114 aa18.31■□□□□ 0.52
MBD1-203ENST00000339998 NPHP1O15259 732 aa18.31■□□□□ 0.52
MBD1-203ENST00000339998 SMIM22K7EJ46 135 aa18.3■□□□□ 0.52
MBD1-203ENST00000339998 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
MBD1-203ENST00000339998 MYH7P12883 1935 aa18.3■□□□□ 0.52
MBD1-203ENST00000339998 PTMSP20962 102 aa18.3■□□□□ 0.52
MBD1-203ENST00000339998 IMMTQ16891 758 aaKnown RBP18.3■□□□□ 0.52
MBD1-203ENST00000339998 L1TD1Q5T7N2 865 aaKnown RBP18.3■□□□□ 0.52
MBD1-203ENST00000339998 MBD4O95243 580 aa18.3■□□□□ 0.52
MBD1-203ENST00000339998 CTDNEP1O95476 244 aa18.3■□□□□ 0.52
MBD1-203ENST00000339998 UQCRFS1P1P0C7P4 283 aa18.3■□□□□ 0.52
MBD1-203ENST00000339998 TBC1D10CQ8IV04 446 aa18.3■□□□□ 0.52
MBD1-203ENST00000339998 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
MBD1-203ENST00000339998 TFIP11Q9UBB9 837 aaKnown RBP18.3■□□□□ 0.52
MBD1-203ENST00000339998 LRP5O75197 1615 aa18.29■□□□□ 0.52
MBD1-203ENST00000339998 ADGRA1Q86SQ6 560 aa18.29■□□□□ 0.52
MBD1-203ENST00000339998 ZNF512BQ96KM6 892 aaPredicted RBP18.29■□□□□ 0.52
MBD1-203ENST00000339998 ALDH8A1Q9H2A2 487 aaPredicted RBP18.29■□□□□ 0.52
MBD1-203ENST00000339998 TFCP2L1Q9NZI6 479 aa18.29■□□□□ 0.52
MBD1-203ENST00000339998 ZNF213O14771 459 aa18.29■□□□□ 0.52
MBD1-203ENST00000339998 LRRFIP1Q32MZ4 808 aaKnown RBP18.29■□□□□ 0.52
MBD1-203ENST00000339998 AIDAQ96BJ3 306 aa18.29■□□□□ 0.52
MBD1-203ENST00000339998 KDM4AO75164 1064 aa18.28■□□□□ 0.52
MBD1-203ENST00000339998 RXRAP19793 462 aa18.28■□□□□ 0.52
MBD1-203ENST00000339998 RFC4P35249 363 aa18.28■□□□□ 0.52
MBD1-203ENST00000339998 ANTXR2P58335 489 aa18.28■□□□□ 0.52
MBD1-203ENST00000339998 GUCY1B3Q02153 619 aa18.28■□□□□ 0.52
MBD1-203ENST00000339998 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
MBD1-203ENST00000339998 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
MBD1-203ENST00000339998 TRIM37O94972 964 aa18.28■□□□□ 0.52
MBD1-203ENST00000339998 SF3B3Q15393 1217 aaKnown RBP18.28■□□□□ 0.52
MBD1-203ENST00000339998 EPB41L4AQ9HCS5 686 aaPredicted RBP18.28■□□□□ 0.52
MBD1-203ENST00000339998 LRP2BPQ9P2M1 347 aa18.28■□□□□ 0.52
MBD1-203ENST00000339998 BCORQ6W2J9 1755 aa18.28■□□□□ 0.52
MBD1-203ENST00000339998 THSD7AQ9UPZ6 1657 aa18.28■□□□□ 0.52
MBD1-203ENST00000339998 LCORLQ8N3X6 602 aa18.27■□□□□ 0.52
MBD1-203ENST00000339998 STRBPQ96SI9 672 aaKnown RBP18.27■□□□□ 0.52
MBD1-203ENST00000339998 TACC3Q9Y6A5 838 aa18.27■□□□□ 0.52
MBD1-203ENST00000339998 PRC1O43663 620 aa18.27■□□□□ 0.52
MBD1-203ENST00000339998 CTDSPL2Q05D32 466 aa18.27■□□□□ 0.52
MBD1-203ENST00000339998 UBE3CQ15386 1083 aa18.27■□□□□ 0.52
MBD1-203ENST00000339998 RC3H1Q5TC82 1133 aaKnown RBP18.27■□□□□ 0.52
MBD1-203ENST00000339998 TXNRD3Q86VQ6 643 aa18.27■□□□□ 0.52
MBD1-203ENST00000339998 NLRP3Q96P20 1036 aa18.27■□□□□ 0.52
MBD1-203ENST00000339998 PDIA3P30101 505 aaKnown RBP18.27■□□□□ 0.51
MBD1-203ENST00000339998 AEBP2Q6ZN18 517 aaPredicted RBP18.27■□□□□ 0.51
MBD1-203ENST00000339998 TRPC5Q9UL62 973 aaPredicted RBP18.27■□□□□ 0.51
MBD1-203ENST00000339998 MRE11P49959 708 aa18.26■□□□□ 0.51
MBD1-203ENST00000339998 TRAPPC3LQ5T215 181 aa18.26■□□□□ 0.51
MBD1-203ENST00000339998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.26■□□□□ 0.51
MBD1-203ENST00000339998 NFIXQ14938 502 aa18.26■□□□□ 0.51
MBD1-203ENST00000339998 CYB5R4Q7L1T6 521 aa18.26■□□□□ 0.51
MBD1-203ENST00000339998 NSUN7Q8NE18 718 aaKnown RBP18.26■□□□□ 0.51
MBD1-203ENST00000339998 GPR101Q96P66 508 aaPredicted RBP18.26■□□□□ 0.51
MBD1-203ENST00000339998 GJB4Q9NTQ9 266 aa18.26■□□□□ 0.51
MBD1-203ENST00000339998 BSDC1Q9NW68 430 aaPredicted RBP18.26■□□□□ 0.51
MBD1-203ENST00000339998 CTNNA3Q9UI47 895 aa18.26■□□□□ 0.51
MBD1-203ENST00000339998 B4E1Z4 1266 aa18.25■□□□□ 0.51
MBD1-203ENST00000339998 HMGB1P09429 215 aaKnown RBP18.25■□□□□ 0.51
MBD1-203ENST00000339998 RPS8P62241 208 aaKnown RBP18.25■□□□□ 0.51
MBD1-203ENST00000339998 MAP3K12Q12852 859 aa18.25■□□□□ 0.51
MBD1-203ENST00000339998 OTUD7BQ6GQQ9 843 aa18.25■□□□□ 0.51
MBD1-203ENST00000339998 ZSCAN25Q6NSZ9 544 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms