RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 ABCC1P33527 1531 aa18.75■□□□□ 0.59
PDZD8-201ENST00000334464 PAIP2Q9BPZ3 127 aaKnown RBP18.75■□□□□ 0.59
PDZD8-201ENST00000334464 CROCCP2Q86T23 111 aa18.75■□□□□ 0.59
PDZD8-201ENST00000334464 RHPN1Q8TCX5 695 aa18.75■□□□□ 0.59
PDZD8-201ENST00000334464 IFT74Q96LB3 600 aa18.75■□□□□ 0.59
PDZD8-201ENST00000334464 PAG1Q9NWQ8 432 aa18.75■□□□□ 0.59
PDZD8-201ENST00000334464 EBAG9O00559 213 aa18.75■□□□□ 0.59
PDZD8-201ENST00000334464 SPTLC2O15270 562 aa18.75■□□□□ 0.59
PDZD8-201ENST00000334464 SMTNP53814 917 aa18.75■□□□□ 0.59
PDZD8-201ENST00000334464 ARHGEF12Q9NZN5 1544 aa18.75■□□□□ 0.59
PDZD8-201ENST00000334464 CCDC63Q8NA47 563 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 FOXO3O43524 673 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 STK10O94804 968 aaKnown RBP18.74■□□□□ 0.59
PDZD8-201ENST00000334464 PSMC4P43686 418 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 IQUBQ8NA54 791 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 TFIP11Q9UBB9 837 aaKnown RBP18.74■□□□□ 0.59
PDZD8-201ENST00000334464 WDR7Q9Y4E6 1490 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 SNX21Q969T3 373 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 PPIP5K1Q6PFW1 1433 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 INF2Q27J81 1249 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 SEL1L2Q5TEA6 688 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 USHBP1Q8N6Y0 703 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 TBC1D31Q96DN5 1066 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 EMILIN1Q9Y6C2 1016 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 CALCOCO2Q13137 446 aa18.74■□□□□ 0.59
PDZD8-201ENST00000334464 HCLS1P14317 486 aaPredicted RBP18.74■□□□□ 0.59
PDZD8-201ENST00000334464 CCDC94Q9BW85 323 aaPredicted RBP18.74■□□□□ 0.59
PDZD8-201ENST00000334464 UHRF1BP1LA0JNW5 1464 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 MAGEB6P1A0A0J9YX57 407 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 ADAMTS2O95450 1211 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 ZNF622Q969S3 477 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDZD8-201ENST00000334464 CCDC26Q8TAB7 109 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 HOOK2Q96ED9 719 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 UBXN1Q04323 297 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 TCHPQ9BT92 498 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 INTS4Q96HW7 963 aaKnown RBP18.73■□□□□ 0.59
PDZD8-201ENST00000334464 EYA3Q99504 573 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 ZNF518AQ6AHZ1 1483 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 TNRQ92752 1358 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 AFMP43652 599 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 PLXNC1O60486 1568 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 TNNI2P48788 182 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 TMOD4Q9NZQ9 345 aa18.73■□□□□ 0.59
PDZD8-201ENST00000334464 KRT28Q7Z3Y7 464 aa18.72■□□□□ 0.59
PDZD8-201ENST00000334464 TMX3Q96JJ7 454 aa18.72■□□□□ 0.59
PDZD8-201ENST00000334464 CFAP74Q9C0B2 1584 aa18.72■□□□□ 0.59
PDZD8-201ENST00000334464 IRX3P78415 501 aaPredicted RBP18.72■□□□□ 0.59
PDZD8-201ENST00000334464 TAF12Q16514 161 aa18.72■□□□□ 0.59
PDZD8-201ENST00000334464 PPP1R7Q15435 360 aa18.72■□□□□ 0.59
PDZD8-201ENST00000334464 B4GALNT4Q76KP1 1039 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 LUC7L2Q9Y383 392 aaKnown RBP18.71■□□□□ 0.59
PDZD8-201ENST00000334464 PLCB3Q01970 1234 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 BRF1Q92994 677 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 DTHD1Q6ZMT9 781 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 USH1CQ9Y6N9 552 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 ELP1O95163 1332 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 RBM26Q5T8P6 1007 aaKnown RBP18.71■□□□□ 0.59
PDZD8-201ENST00000334464 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 NKIRAS1Q9NYS0 192 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 WDR44Q5JSH3 913 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 CDAN1Q8IWY9 1227 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 EPB41P11171 864 aaKnown RBP18.71■□□□□ 0.59
PDZD8-201ENST00000334464 BRDTQ58F21 947 aaPredicted RBP18.71■□□□□ 0.59
PDZD8-201ENST00000334464 UBL4BQ8N7F7 174 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 STX10O60499 249 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 ESYT1Q9BSJ8 1104 aa18.71■□□□□ 0.59
PDZD8-201ENST00000334464 PLCD1P51178 756 aa18.71■□□□□ 0.58
PDZD8-201ENST00000334464 FLT4P35916 1363 aa18.71■□□□□ 0.58
PDZD8-201ENST00000334464 MAP7Q14244 749 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 CCDC65Q8IXS2 484 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 ATRIPQ8WXE1 791 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 PANK2Q9BZ23 570 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 FAM114A2Q9NRY5 505 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 ACTN4O43707 911 aaKnown RBP18.7■□□□□ 0.58
PDZD8-201ENST00000334464 DKC1O60832 514 aaKnown RBP eCLIP18.7■□□□□ 0.58
PDZD8-201ENST00000334464 IQCDQ96DY2 449 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 F13A1P00488 732 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.7■□□□□ 0.58
PDZD8-201ENST00000334464 FAM169AQ9Y6X4 670 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 CIB2O75838 187 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 C14orf93Q9H972 538 aaKnown RBP18.7■□□□□ 0.58
PDZD8-201ENST00000334464 PDE1AP54750 535 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 MCM6Q14566 821 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 Q6ZUG5 572 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 MMRN2Q9H8L6 949 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 CHPF2Q9P2E5 772 aa18.7■□□□□ 0.58
PDZD8-201ENST00000334464 SDSP20132 328 aa18.69■□□□□ 0.58
PDZD8-201ENST00000334464 CNNM4Q6P4Q7 775 aa18.69■□□□□ 0.58
PDZD8-201ENST00000334464 CPLX4Q7Z7G2 160 aa18.69■□□□□ 0.58
PDZD8-201ENST00000334464 PUS7Q96PZ0 661 aaKnown RBP18.69■□□□□ 0.58
PDZD8-201ENST00000334464 CA8P35219 290 aa18.69■□□□□ 0.58
PDZD8-201ENST00000334464 TAOK1Q7L7X3 1001 aa18.69■□□□□ 0.58
PDZD8-201ENST00000334464 SRGAP1Q7Z6B7 1085 aa18.69■□□□□ 0.58
PDZD8-201ENST00000334464 RBM8AQ9Y5S9 174 aaKnown RBP18.69■□□□□ 0.58
PDZD8-201ENST00000334464 LACTBP83111 547 aaPredicted RBP18.69■□□□□ 0.58
PDZD8-201ENST00000334464 HAUS3Q68CZ6 603 aa18.69■□□□□ 0.58
PDZD8-201ENST00000334464 HDXQ7Z353 690 aa18.69■□□□□ 0.58
PDZD8-201ENST00000334464 ANKRD44Q8N8A2 993 aa18.69■□□□□ 0.58
PDZD8-201ENST00000334464 DNAI1Q9UI46 699 aa18.69■□□□□ 0.58
PDZD8-201ENST00000334464 ATP6V1AP38606 617 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms