RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 MICALL1Q8N3F8 863 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 NECAB1Q8N987 351 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 TBC1D22AQ8WUA7 517 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 MRPS27Q92552 414 aaKnown RBP9.65□□□□□ -0.86
SKA2-201ENST00000330137 CUTAO60888 179 aa9.64□□□□□ -0.87
SKA2-201ENST00000330137 FANCCQ00597 558 aa9.64□□□□□ -0.87
SKA2-201ENST00000330137 CNPY4Q8N129 248 aa9.64□□□□□ -0.87
SKA2-201ENST00000330137 RGPD1P0DJD0 1748 aa9.64□□□□□ -0.87
SKA2-201ENST00000330137 FANCGO15287 622 aa9.64□□□□□ -0.87
SKA2-201ENST00000330137 NCAPHQ15003 741 aa9.64□□□□□ -0.87
SKA2-201ENST00000330137 FAM173BQ6P4H8 233 aa9.64□□□□□ -0.87
SKA2-201ENST00000330137 TMEM139Q8IV31 216 aa9.64□□□□□ -0.87
SKA2-201ENST00000330137 CNNM3Q8NE01 707 aa9.64□□□□□ -0.87
SKA2-201ENST00000330137 CDC23Q9UJX2 597 aa9.64□□□□□ -0.87
SKA2-201ENST00000330137 RBM8AQ9Y5S9 174 aaKnown RBP9.64□□□□□ -0.87
SKA2-201ENST00000330137 SLC27A2O14975 620 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 UBTFL1P0CB47 393 aaPredicted RBP9.63□□□□□ -0.87
SKA2-201ENST00000330137 GNG11P61952 73 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 PIP4K2BP78356 416 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 PTH1RQ03431 593 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 TOB2Q14106 344 aaPredicted RBP9.63□□□□□ -0.87
SKA2-201ENST00000330137 KIF4BQ2VIQ3 1234 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 SLC4A10Q6U841 1118 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 GBP6Q6ZN66 633 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 NAA15Q9BXJ9 866 aaKnown RBP9.63□□□□□ -0.87
SKA2-201ENST00000330137 ANKZF1Q9H8Y5 726 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 SPG7Q9UQ90 795 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 FAN1Q9Y2M0 1017 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 FAM83GA6ND36 823 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 TBX2Q13207 712 aaPredicted RBP9.63□□□□□ -0.87
SKA2-201ENST00000330137 SART3Q15020 963 aaKnown RBP9.63□□□□□ -0.87
SKA2-201ENST00000330137 MAP9Q49MG5 647 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 NUTM1Q86Y26 1132 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 ELOA2Q8IYF1 753 aaPredicted RBP9.63□□□□□ -0.87
SKA2-201ENST00000330137 CERKQ8TCT0 537 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 AFAP1L1Q8TED9 768 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 GOLPH3LQ9H4A5 285 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 RTEL1Q9NZ71 1219 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 MON2Q7Z3U7 1717 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 CPA1P15085 419 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 HNRNPH1P31943 449 aaKnown RBP9.63□□□□□ -0.87
SKA2-201ENST00000330137 CASP8Q14790 479 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 WHAMMP3Q1A5X7 153 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 USPL1Q5W0Q7 1092 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 TICAM2Q86XR7 235 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 PRPF38AQ8NAV1 312 aaKnown RBP9.63□□□□□ -0.87
SKA2-201ENST00000330137 BRF1Q92994 677 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 LARP6Q9BRS8 491 aaKnown RBP9.63□□□□□ -0.87
SKA2-201ENST00000330137 MYO1AQ9UBC5 1043 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 LRRC37A3O60309 1634 aa9.63□□□□□ -0.87
SKA2-201ENST00000330137 TMEM131LA2VDJ0 1609 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 CCDC189A1A4V9 331 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 EBAG9O00559 213 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 YEATS4O95619 227 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 TOP1P11387 765 aaKnown RBP9.62□□□□□ -0.87
SKA2-201ENST00000330137 FLIIQ13045 1269 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 FSIP1Q8NA03 581 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 KCNG4Q8TDN1 519 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 BAG1Q99933 345 aaPredicted RBP9.62□□□□□ -0.87
SKA2-201ENST00000330137 SDF4Q9BRK5 362 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 ECHDC1Q9NTX5 307 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 RFX7Q2KHR2 1363 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 SLIT1O75093 1534 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 AMPHP49418 695 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 MNAT1P51948 309 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 UBASH3AP57075 661 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 MTX1Q13505 466 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 NEDD9Q14511 834 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 ARHGEF25Q86VW2 580 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 EGFL6Q8IUX8 553 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 AMOTL1Q8IY63 956 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 USP44Q9H0E7 712 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 CEMIPQ8WUJ3 1361 aa9.62□□□□□ -0.87
SKA2-201ENST00000330137 SURF6O75683 361 aaKnown RBP9.61□□□□□ -0.87
SKA2-201ENST00000330137 PRPF6O94906 941 aaKnown RBP9.61□□□□□ -0.87
SKA2-201ENST00000330137 HMGB1P09429 215 aaKnown RBP9.61□□□□□ -0.87
SKA2-201ENST00000330137 MCM6Q14566 821 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 GRIPAP1Q4V328 841 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 CDK19Q9BWU1 502 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 GNL3LQ9NVN8 582 aaKnown RBP9.61□□□□□ -0.87
SKA2-201ENST00000330137 SLC3A2P08195 630 aaKnown RBP9.61□□□□□ -0.87
SKA2-201ENST00000330137 MYL5Q02045 173 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 YTHDF3Q7Z739 585 aaKnown RBP9.61□□□□□ -0.87
SKA2-201ENST00000330137 RUBCNQ92622 972 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 CABS1Q96KC9 395 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 WDR24Q96S15 920 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 PAGR1Q9BTK6 254 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 FAM204AQ9H8W3 233 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 CABP1Q9NZU7 370 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 TUBE1Q9UJT0 475 aa9.61□□□□□ -0.87
SKA2-201ENST00000330137 ARHGAP23Q9P227 1491 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 MED23Q9ULK4 1368 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 F6X3S4 739 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 PFKFB2O60825 505 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 ALDH1L1O75891 902 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 CCDC175P0C221 793 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 PLCB4Q15147 1175 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 E2F4Q16254 413 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 C11orf91Q3C1V1 193 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 DPCR1Q3MIW9 517 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms