RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 PLIN1O60240 522 aa18.5■□□□□ 0.55
TSPO-201ENST00000329563 WNT10BO00744 389 aa18.49■□□□□ 0.55
TSPO-201ENST00000329563 SASH1O94885 1247 aa18.49■□□□□ 0.55
TSPO-201ENST00000329563 IL1R1P14778 569 aa18.49■□□□□ 0.55
TSPO-201ENST00000329563 KIAA0825Q8IV33 1275 aa18.49■□□□□ 0.55
TSPO-201ENST00000329563 CNNM1Q9NRU3 951 aa18.49■□□□□ 0.55
TSPO-201ENST00000329563 SMC4Q9NTJ3 1288 aa18.49■□□□□ 0.55
TSPO-201ENST00000329563 FAM155AB1AL88 458 aaPredicted RBP18.48■□□□□ 0.55
TSPO-201ENST00000329563 SLC10A3P09131 477 aa18.48■□□□□ 0.55
TSPO-201ENST00000329563 NF2P35240 595 aa18.48■□□□□ 0.55
TSPO-201ENST00000329563 TAF7LQ5H9L4 462 aa18.48■□□□□ 0.55
TSPO-201ENST00000329563 KLHDC4Q8TBB5 520 aa18.48■□□□□ 0.55
TSPO-201ENST00000329563 ZBED3Q96IU2 234 aaPredicted RBP18.48■□□□□ 0.55
TSPO-201ENST00000329563 JAG2Q9Y219 1238 aa18.48■□□□□ 0.55
TSPO-201ENST00000329563 RIPOR2Q9Y4F9 1068 aa18.48■□□□□ 0.55
TSPO-201ENST00000329563 PCDHAC2Q9Y5I4 1007 aa18.48■□□□□ 0.55
TSPO-201ENST00000329563 CCDC85CA6NKD9 419 aa18.47■□□□□ 0.55
TSPO-201ENST00000329563 LRRC24Q50LG9 513 aa18.47■□□□□ 0.55
TSPO-201ENST00000329563 PRAMEF18Q5VWM3 479 aa18.47■□□□□ 0.55
TSPO-201ENST00000329563 HDAC9Q9UKV0 1011 aa18.47■□□□□ 0.55
TSPO-201ENST00000329563 KIF23Q02241 960 aaPredicted RBP18.46■□□□□ 0.55
TSPO-201ENST00000329563 AOX1Q06278 1338 aa18.46■□□□□ 0.55
TSPO-201ENST00000329563 GYG1P46976 350 aa18.45■□□□□ 0.54
TSPO-201ENST00000329563 RARSP54136 660 aaKnown RBP18.45■□□□□ 0.54
TSPO-201ENST00000329563 MOB2Q70IA6 237 aa18.45■□□□□ 0.54
TSPO-201ENST00000329563 ZNF804AQ7Z570 1209 aa18.45■□□□□ 0.54
TSPO-201ENST00000329563 VGLL2Q8N8G2 317 aa18.45■□□□□ 0.54
TSPO-201ENST00000329563 MCOLN1Q9GZU1 580 aa18.45■□□□□ 0.54
TSPO-201ENST00000329563 NOB1Q9ULX3 412 aaKnown RBP18.45■□□□□ 0.54
TSPO-201ENST00000329563 ARAP2Q8WZ64 1704 aa18.44■□□□□ 0.54
TSPO-201ENST00000329563 RFX5P48382 616 aaPredicted RBP18.44■□□□□ 0.54
TSPO-201ENST00000329563 DGKZQ13574 1117 aa18.44■□□□□ 0.54
TSPO-201ENST00000329563 UBE4AQ14139 1066 aa18.44■□□□□ 0.54
TSPO-201ENST00000329563 FAM84BQ96KN1 310 aaPredicted RBP18.44■□□□□ 0.54
TSPO-201ENST00000329563 ECM29Q5VYK3 1845 aa18.44■□□□□ 0.54
TSPO-201ENST00000329563 TTLL12Q14166 644 aaPredicted RBP18.43■□□□□ 0.54
TSPO-201ENST00000329563 APOBEC3FQ8IUX4 373 aaKnown RBP18.43■□□□□ 0.54
TSPO-201ENST00000329563 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.43■□□□□ 0.54
TSPO-201ENST00000329563 TDRD7Q8NHU6 1098 aaKnown RBP18.43■□□□□ 0.54
TSPO-201ENST00000329563 MROH5Q6ZUA9 1318 aa18.43■□□□□ 0.54
TSPO-201ENST00000329563 F8W031 263 aaPredicted RBP18.42■□□□□ 0.54
TSPO-201ENST00000329563 RASAL3Q86YV0 1011 aa18.42■□□□□ 0.54
TSPO-201ENST00000329563 COL1A1P02452 1464 aaPredicted RBP18.41■□□□□ 0.54
TSPO-201ENST00000329563 TRPA1O75762 1119 aa18.41■□□□□ 0.54
TSPO-201ENST00000329563 MLLT1Q03111 559 aaPredicted RBP18.41■□□□□ 0.54
TSPO-201ENST00000329563 RNF186Q9NXI6 227 aa18.41■□□□□ 0.54
TSPO-201ENST00000329563 FAM205AQ6ZU69 1335 aa18.41■□□□□ 0.54
TSPO-201ENST00000329563 HIBADHP31937 336 aaKnown RBP18.4■□□□□ 0.54
TSPO-201ENST00000329563 FKBP1AP62942 108 aaKnown RBP18.4■□□□□ 0.54
TSPO-201ENST00000329563 GRIK5Q16478 980 aa18.4■□□□□ 0.54
TSPO-201ENST00000329563 MTMR14Q8NCE2 650 aa18.4■□□□□ 0.54
TSPO-201ENST00000329563 CSRNP1Q96S65 589 aa18.4■□□□□ 0.54
TSPO-201ENST00000329563 SSC5DA1L4H1 1573 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 IPO8O15397 1037 aaKnown RBP18.39■□□□□ 0.53
TSPO-201ENST00000329563 PDE8BO95263 885 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 PTPN12Q05209 780 aaKnown RBP18.39■□□□□ 0.53
TSPO-201ENST00000329563 DLGAP5Q15398 846 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 CFAP100Q494V2 611 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 METTL24Q5JXM2 366 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 ARMC9Q7Z3E5 817 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 FBXO33Q7Z6M2 555 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 PRMT6Q96LA8 375 aaPredicted RBP18.39■□□□□ 0.53
TSPO-201ENST00000329563 FZD1Q9UP38 647 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 IQSEC3Q9UPP2 1182 aaPredicted RBP18.39■□□□□ 0.53
TSPO-201ENST00000329563 TNNQ9UQP3 1299 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 KIF16BQ96L93 1317 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 PDE4DIPQ5VU43 2346 aa18.39■□□□□ 0.53
TSPO-201ENST00000329563 UBE2Q2LH0YL09 131 aa18.38■□□□□ 0.53
TSPO-201ENST00000329563 MYO1BO43795 1136 aa18.38■□□□□ 0.53
TSPO-201ENST00000329563 FGFR2P21802 821 aa18.38■□□□□ 0.53
TSPO-201ENST00000329563 RGS19P49795 217 aa18.38■□□□□ 0.53
TSPO-201ENST00000329563 ATG9AQ7Z3C6 839 aa18.38■□□□□ 0.53
TSPO-201ENST00000329563 MEIS3Q99687 375 aa18.38■□□□□ 0.53
TSPO-201ENST00000329563 SUPT16HQ9Y5B9 1047 aaKnown RBP18.38■□□□□ 0.53
TSPO-201ENST00000329563 CLRN2A0PK11 232 aa18.37■□□□□ 0.53
TSPO-201ENST00000329563 SPDYE2BA6NHP3 402 aa18.37■□□□□ 0.53
TSPO-201ENST00000329563 SPDYE6P0CI01 402 aa18.37■□□□□ 0.53
TSPO-201ENST00000329563 SREBF2Q12772 1141 aa18.37■□□□□ 0.53
TSPO-201ENST00000329563 MFSD14BQ5SR56 506 aa18.37■□□□□ 0.53
TSPO-201ENST00000329563 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
TSPO-201ENST00000329563 EYA2O00167 538 aa18.36■□□□□ 0.53
TSPO-201ENST00000329563 BCAR3O75815 825 aa18.36■□□□□ 0.53
TSPO-201ENST00000329563 UBTFL1P0CB47 393 aaPredicted RBP18.36■□□□□ 0.53
TSPO-201ENST00000329563 MS4A1P11836 297 aa18.36■□□□□ 0.53
TSPO-201ENST00000329563 BCAMP50895 628 aa18.36■□□□□ 0.53
TSPO-201ENST00000329563 ARHGAP45Q92619 1136 aa18.36■□□□□ 0.53
TSPO-201ENST00000329563 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
TSPO-201ENST00000329563 PPP2R3BQ9Y5P8 575 aa18.36■□□□□ 0.53
TSPO-201ENST00000329563 LRRFIP2Q9Y608 721 aaKnown RBP18.36■□□□□ 0.53
TSPO-201ENST00000329563 PRKG1Q13976 671 aa18.35■□□□□ 0.53
TSPO-201ENST00000329563 CTU1Q7Z7A3 348 aaKnown RBP18.35■□□□□ 0.53
TSPO-201ENST00000329563 TTF2Q9UNY4 1162 aaKnown RBP18.35■□□□□ 0.53
TSPO-201ENST00000329563 INTS3Q68E01 1043 aaKnown RBP18.34■□□□□ 0.53
TSPO-201ENST00000329563 SIL1Q9H173 461 aa18.34■□□□□ 0.53
TSPO-201ENST00000329563 TRIM27P14373 513 aa18.33■□□□□ 0.52
TSPO-201ENST00000329563 RRP1P56182 461 aaKnown RBP18.33■□□□□ 0.52
TSPO-201ENST00000329563 CHAF1AQ13111 956 aaPredicted RBP18.33■□□□□ 0.52
TSPO-201ENST00000329563 PUM3Q15397 648 aaKnown RBP18.33■□□□□ 0.52
TSPO-201ENST00000329563 PKN2Q16513 984 aaKnown RBP18.33■□□□□ 0.52
TSPO-201ENST00000329563 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms