RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TLL2Q9Y6L7 1015 aa34.41■■■■□ 3.1
ATPAF1-201ENST00000329231 FAM205AQ6ZU69 1335 aa34.4■■■■□ 3.1
ATPAF1-201ENST00000329231 PITPNM2Q9BZ72 1349 aa34.4■■■■□ 3.1
ATPAF1-201ENST00000329231 ADM5C9JUS6 153 aa34.4■■■■□ 3.1
ATPAF1-201ENST00000329231 VEGFBP49765 207 aa34.4■■■■□ 3.1
ATPAF1-201ENST00000329231 DZIP1LQ8IYY4 767 aaKnown RBP34.4■■■■□ 3.1
ATPAF1-201ENST00000329231 COPRSQ9NQ92 184 aa34.4■■■■□ 3.1
ATPAF1-201ENST00000329231 FGFR2P21802 821 aa34.39■■■■□ 3.1
ATPAF1-201ENST00000329231 MTX1Q13505 466 aa34.39■■■■□ 3.1
ATPAF1-201ENST00000329231 NBPF9Q3BBW0 867 aa34.39■■■■□ 3.1
ATPAF1-201ENST00000329231 JAG2Q9Y219 1238 aa34.39■■■■□ 3.1
ATPAF1-201ENST00000329231 WNT10BO00744 389 aa34.38■■■■□ 3.09
ATPAF1-201ENST00000329231 SRGAP3O43295 1099 aa34.38■■■■□ 3.09
ATPAF1-201ENST00000329231 IL15P40933 162 aaPredicted RBP34.38■■■■□ 3.09
ATPAF1-201ENST00000329231 CEP126Q9P2H0 1117 aa34.38■■■■□ 3.09
ATPAF1-201ENST00000329231 SLC5A1P13866 664 aa34.37■■■■□ 3.09
ATPAF1-201ENST00000329231 DLK2Q6UY11 383 aa34.37■■■■□ 3.09
ATPAF1-201ENST00000329231 LPIN2Q92539 896 aa34.37■■■■□ 3.09
ATPAF1-201ENST00000329231 PA2G4Q9UQ80 394 aaKnown RBP34.37■■■■□ 3.09
ATPAF1-201ENST00000329231 POLR2AP24928 1970 aaKnown RBP34.36■■■■□ 3.09
ATPAF1-201ENST00000329231 SAPCD2Q86UD0 394 aa34.36■■■■□ 3.09
ATPAF1-201ENST00000329231 FRAT2O75474 233 aaPredicted RBP34.35■■■■□ 3.09
ATPAF1-201ENST00000329231 MFSD14BQ5SR56 506 aa34.35■■■■□ 3.09
ATPAF1-201ENST00000329231 F8W031 263 aaPredicted RBP34.34■■■■□ 3.09
ATPAF1-201ENST00000329231 BCAMP50895 628 aa34.34■■■■□ 3.09
ATPAF1-201ENST00000329231 PAXIP1Q6ZW49 1069 aaPredicted RBP34.34■■■■□ 3.09
ATPAF1-201ENST00000329231 ECE1P42892 770 aa34.33■■■■□ 3.09
ATPAF1-201ENST00000329231 DLGAP5Q15398 846 aa34.33■■■■□ 3.09
ATPAF1-201ENST00000329231 ITPRIPQ8IWB1 547 aa34.33■■■■□ 3.09
ATPAF1-201ENST00000329231 ZBED3Q96IU2 234 aaPredicted RBP34.33■■■■□ 3.09
ATPAF1-201ENST00000329231 HHIPL1Q96JK4 782 aa34.33■■■■□ 3.09
ATPAF1-201ENST00000329231 WDR33Q9C0J8 1336 aaKnown RBP34.32■■■■□ 3.09
ATPAF1-201ENST00000329231 MTMR14Q8NCE2 650 aa34.32■■■■□ 3.08
ATPAF1-201ENST00000329231 IQSEC3Q9UPP2 1182 aaPredicted RBP34.32■■■■□ 3.08
ATPAF1-201ENST00000329231 RLBP1P12271 317 aa34.31■■■■□ 3.08
ATPAF1-201ENST00000329231 ATP2B3Q16720 1220 aa34.31■■■■□ 3.08
ATPAF1-201ENST00000329231 C2orf69Q8N8R5 385 aa34.31■■■■□ 3.08
ATPAF1-201ENST00000329231 CDCA5Q96FF9 252 aa34.31■■■■□ 3.08
ATPAF1-201ENST00000329231 CAPNS2Q96L46 248 aa34.31■■■■□ 3.08
ATPAF1-201ENST00000329231 GBA2Q9HCG7 927 aaPredicted RBP34.31■■■■□ 3.08
ATPAF1-201ENST00000329231 TBC1D22AQ8WUA7 517 aa34.3■■■■□ 3.08
ATPAF1-201ENST00000329231 HSPA1AP0DMV8 641 aaKnown RBP34.29■■■■□ 3.08
ATPAF1-201ENST00000329231 HSPA1BP0DMV9 641 aaKnown RBP34.29■■■■□ 3.08
ATPAF1-201ENST00000329231 CHAF1AQ13111 956 aaPredicted RBP34.29■■■■□ 3.08
ATPAF1-201ENST00000329231 MS4A1P11836 297 aa34.28■■■■□ 3.08
ATPAF1-201ENST00000329231 CFAP100Q494V2 611 aa34.28■■■■□ 3.08
ATPAF1-201ENST00000329231 CYP4F22Q6NT55 531 aa34.28■■■■□ 3.08
ATPAF1-201ENST00000329231 APOBEC3FQ8IUX4 373 aaKnown RBP34.28■■■■□ 3.08
ATPAF1-201ENST00000329231 HUNKP57058 714 aa34.27■■■■□ 3.08
ATPAF1-201ENST00000329231 TTF2Q9UNY4 1162 aaKnown RBP34.27■■■■□ 3.08
ATPAF1-201ENST00000329231 MYO1BO43795 1136 aa34.26■■■■□ 3.08
ATPAF1-201ENST00000329231 RBM5P52756 815 aaKnown RBP eCLIP34.26■■■■□ 3.08
ATPAF1-201ENST00000329231 GRM1Q13255 1194 aa34.26■■■■□ 3.08
ATPAF1-201ENST00000329231 SCAF8Q9UPN6 1271 aaKnown RBP34.26■■■■□ 3.08
ATPAF1-201ENST00000329231 PNMA6EA0A0J9YXQ4 647 aa34.25■■■■□ 3.07
ATPAF1-201ENST00000329231 SPDYE2BA6NHP3 402 aa34.25■■■■□ 3.07
ATPAF1-201ENST00000329231 ZBTB7BO15156 539 aaPredicted RBP34.25■■■■□ 3.07
ATPAF1-201ENST00000329231 SPDYE6P0CI01 402 aa34.25■■■■□ 3.07
ATPAF1-201ENST00000329231 SERPINA10Q9UK55 444 aa34.25■■■■□ 3.07
ATPAF1-201ENST00000329231 RCAN3Q9UKA8 241 aa34.25■■■■□ 3.07
ATPAF1-201ENST00000329231 GNL3LQ9NVN8 582 aaKnown RBP34.24■■■■□ 3.07
ATPAF1-201ENST00000329231 PCNTO95613 3336 aa34.24■■■■□ 3.07
ATPAF1-201ENST00000329231 PANK1Q8TE04 598 aa34.23■■■■□ 3.07
ATPAF1-201ENST00000329231 AKAP2Q9Y2D5 859 aa34.23■■■■□ 3.07
ATPAF1-201ENST00000329231 PCDHAC2Q9Y5I4 1007 aa34.23■■■■□ 3.07
ATPAF1-201ENST00000329231 PRMT6Q96LA8 375 aaPredicted RBP34.22■■■■□ 3.07
ATPAF1-201ENST00000329231 FKBP1BP68106 108 aa34.21■■■■□ 3.07
ATPAF1-201ENST00000329231 ATP8B2P98198 1209 aa34.21■■■■□ 3.07
ATPAF1-201ENST00000329231 TFCP2Q12800 502 aa34.21■■■■□ 3.07
ATPAF1-201ENST00000329231 G3BP1Q13283 466 aaKnown RBP eCLIP34.21■■■■□ 3.07
ATPAF1-201ENST00000329231 SUGT1Q9Y2Z0 365 aa34.21■■■■□ 3.07
ATPAF1-201ENST00000329231 NF2P35240 595 aa34.2■■■■□ 3.07
ATPAF1-201ENST00000329231 MAP2K1Q02750 393 aaPredicted RBP34.2■■■■□ 3.07
ATPAF1-201ENST00000329231 PRAMEF18Q5VWM3 479 aa34.2■■■■□ 3.07
ATPAF1-201ENST00000329231 WDR66Q8TBY9 1149 aa34.2■■■■□ 3.07
ATPAF1-201ENST00000329231 C1orf115Q9H7X2 142 aa34.2■■■■□ 3.07
ATPAF1-201ENST00000329231 ARAP2Q8WZ64 1704 aa34.19■■■■□ 3.06
ATPAF1-201ENST00000329231 MAP2K2P36507 400 aa34.19■■■■□ 3.06
ATPAF1-201ENST00000329231 POLA2Q14181 598 aa34.19■■■■□ 3.06
ATPAF1-201ENST00000329231 AIDAQ96BJ3 306 aa34.19■■■■□ 3.06
ATPAF1-201ENST00000329231 CRKP46108 304 aa34.18■■■■□ 3.06
ATPAF1-201ENST00000329231 HDLBPQ00341 1268 aaKnown RBP34.18■■■■□ 3.06
ATPAF1-201ENST00000329231 RGMBQ6NW40 437 aa34.18■■■■□ 3.06
ATPAF1-201ENST00000329231 SSH3Q8TE77 659 aa34.18■■■■□ 3.06
ATPAF1-201ENST00000329231 WBP1LQ9NX94 342 aa34.18■■■■□ 3.06
ATPAF1-201ENST00000329231 CLRN2A0PK11 232 aa34.17■■■■□ 3.06
ATPAF1-201ENST00000329231 COL1A1P02452 1464 aaPredicted RBP34.17■■■■□ 3.06
ATPAF1-201ENST00000329231 TIMM10P62072 90 aa34.17■■■■□ 3.06
ATPAF1-201ENST00000329231 GRIK5Q16478 980 aa34.17■■■■□ 3.06
ATPAF1-201ENST00000329231 DEFB129Q9H1M3 183 aa34.17■■■■□ 3.06
ATPAF1-201ENST00000329231 MAST3O60307 1309 aa34.16■■■■□ 3.06
ATPAF1-201ENST00000329231 A0A1B0GUL7 405 aa34.16■■■■□ 3.06
ATPAF1-201ENST00000329231 SEMA3EO15041 775 aa34.16■■■■□ 3.06
ATPAF1-201ENST00000329231 ADORA1P30542 326 aa34.16■■■■□ 3.06
ATPAF1-201ENST00000329231 PHKA1P46020 1223 aa34.16■■■■□ 3.06
ATPAF1-201ENST00000329231 VEZTQ9HBM0 779 aa34.16■■■■□ 3.06
ATPAF1-201ENST00000329231 DENND2AQ9ULE3 1009 aa34.16■■■■□ 3.06
ATPAF1-201ENST00000329231 PPP2R3BQ9Y5P8 575 aa34.16■■■■□ 3.06
ATPAF1-201ENST00000329231 AOC2O75106 756 aa34.15■■■■□ 3.06
ATPAF1-201ENST00000329231 CCDC102BQ68D86 513 aa34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms