RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ZSCAN25Q6NSZ9 544 aa16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 RBM43Q6ZSC3 357 aaKnown RBP16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 ZNF274Q96GC6 653 aaPredicted RBP16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 CARMIL3Q8ND23 1372 aa16.41■□□□□ 0.22
ATP2C1-201ENST00000328560 ZNF213O14771 459 aa16.41■□□□□ 0.22
ATP2C1-201ENST00000328560 STX1AQ16623 288 aa16.41■□□□□ 0.22
ATP2C1-201ENST00000328560 BIN1O00499 593 aa16.41■□□□□ 0.22
ATP2C1-201ENST00000328560 ATP2B3Q16720 1220 aa16.41■□□□□ 0.22
ATP2C1-201ENST00000328560 CCDC144BQ3MJ40 725 aa16.41■□□□□ 0.22
ATP2C1-201ENST00000328560 CCDC144CPQ8IYA2 1237 aa16.41■□□□□ 0.22
ATP2C1-201ENST00000328560 CAMTA1Q9Y6Y1 1673 aa16.41■□□□□ 0.22
ATP2C1-201ENST00000328560 GPAA1O43292 621 aa16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 CIAO1O76071 339 aa16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 CACTINQ8WUQ7 758 aaKnown RBP16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 DENND2AQ9ULE3 1009 aa16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 PCDHA7Q9UN72 937 aa16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 FAM160A1Q05DH4 1040 aa16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 ILDR1Q86SU0 546 aaPredicted RBP16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 PLA2G4DQ86XP0 818 aa16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 CLIC4Q9Y696 253 aa16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 TPD52L1Q16890 204 aaPredicted RBP16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 ISM2Q6H9L7 571 aa16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 AOPEPQ8N6M6 819 aa16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 ZMYND15Q9H091 742 aa16.4■□□□□ 0.22
ATP2C1-201ENST00000328560 SYNE3Q6ZMZ3 975 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 HELBQ8NG08 1087 aaPredicted RBP16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 ISCA1Q9BUE6 129 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 ADAMTS7Q9UKP4 1686 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 CTAGE5O15320 804 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 TRDNQ13061 729 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 SNW1Q13573 536 aaKnown RBP16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 SLC9C2Q5TAH2 1124 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 HLFQ16534 295 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 STK11IPQ8N1F8 1099 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 NCOA7Q8NI08 942 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 MRPS27Q92552 414 aaKnown RBP16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 APPBP2Q92624 585 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 AGXT2Q9BYV1 514 aa16.39■□□□□ 0.21
ATP2C1-201ENST00000328560 ITGA6P23229 1130 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 IQCB1Q15051 598 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 KLHL34Q8N239 644 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 GREM2Q9H772 168 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 ANO10Q9NW15 660 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 ZNF335Q9H4Z2 1342 aaPredicted RBP16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 TNNT1P13805 278 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 NDUFA8P51970 172 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 GNL2Q13823 731 aaKnown RBP16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 AIFM3Q96NN9 605 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 FOXP2O15409 715 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 ZFYP08048 801 aaPredicted RBP16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 MARCKSP29966 332 aaPredicted RBP16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 CEP57L1Q8IYX8 460 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 ZNF710Q8N1W2 664 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 ATG3Q9NT62 314 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 BTG4Q9NY30 223 aa16.38■□□□□ 0.21
ATP2C1-201ENST00000328560 ARFGEF2Q9Y6D5 1785 aa16.37■□□□□ 0.21
ATP2C1-201ENST00000328560 MTERF4Q7Z6M4 381 aaKnown RBP16.37■□□□□ 0.21
ATP2C1-201ENST00000328560 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
ATP2C1-201ENST00000328560 MCAMP43121 646 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.36■□□□□ 0.211e-6■■■■□ 20.6
ATP2C1-201ENST00000328560 PRDM10Q9NQV6 1147 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 TRMT1Q9NXH9 659 aaKnown RBP16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 TRMT112Q9UI30 125 aaKnown RBP16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 SALL1Q9NSC2 1324 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 MICU3Q86XE3 530 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 PIGBQ92521 554 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 LMTK3Q96Q04 1460 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 PCCAP05165 728 aaPredicted RBP16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 ANTXR2P58335 489 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 NFXL1Q6ZNB6 911 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 ZBTB38Q8NAP3 1195 aaPredicted RBP16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 ENGASEQ8NFI3 743 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 CHMP4CQ96CF2 233 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 TBC1D2BQ9UPU7 963 aa16.36■□□□□ 0.21
ATP2C1-201ENST00000328560 SOS2Q07890 1332 aaPredicted RBP16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 SPTLC2O15270 562 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 FBXO18Q8NFZ0 1043 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 SNAP23O00161 211 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 CAVIN2O95810 425 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 MB21D2Q8IYB1 491 aaPredicted RBP16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 MYL10Q9BUA6 226 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 TOMM22Q9NS69 142 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 ANKRD18BA2A2Z9 1011 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 PHKBQ93100 1093 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 HPS5Q9UPZ3 1129 aa16.35■□□□□ 0.21
ATP2C1-201ENST00000328560 PLEKHG2Q9H7P9 1386 aa16.34■□□□□ 0.21
ATP2C1-201ENST00000328560 B4E1Z4 1266 aa16.34■□□□□ 0.21
ATP2C1-201ENST00000328560 SMC2O95347 1197 aa16.34■□□□□ 0.21
ATP2C1-201ENST00000328560 MYSM1Q5VVJ2 828 aa16.34■□□□□ 0.21
ATP2C1-201ENST00000328560 RTEL1Q9NZ71 1219 aa16.34■□□□□ 0.21
ATP2C1-201ENST00000328560 KIF28PB7ZC32 967 aa16.34■□□□□ 0.21
ATP2C1-201ENST00000328560 IRS4O14654 1257 aaPredicted RBP16.34■□□□□ 0.21
ATP2C1-201ENST00000328560 SKILP12757 684 aa16.34■□□□□ 0.21
ATP2C1-201ENST00000328560 NKX1-1Q15270 411 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms