RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 ZDHHC9Q9Y397 364 aa16.97■□□□□ 0.31
CHEK2-201ENST00000328354 RGPD3A6NKT7 1758 aaPredicted RBP16.97■□□□□ 0.31
CHEK2-201ENST00000328354 RGPD4Q7Z3J3 1758 aa16.97■□□□□ 0.31
CHEK2-201ENST00000328354 MYH13Q9UKX3 1938 aa16.97■□□□□ 0.31
CHEK2-201ENST00000328354 GPAA1O43292 621 aa16.97■□□□□ 0.31
CHEK2-201ENST00000328354 IDH1O75874 414 aaKnown RBP16.97■□□□□ 0.31
CHEK2-201ENST00000328354 HMGB1P09429 215 aaKnown RBP16.97■□□□□ 0.31
CHEK2-201ENST00000328354 ANKRD2Q9GZV1 360 aa16.97■□□□□ 0.31
CHEK2-201ENST00000328354 CTNNA3Q9UI47 895 aa16.97■□□□□ 0.31
CHEK2-201ENST00000328354 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
CHEK2-201ENST00000328354 ZBTB22O15209 634 aa16.96■□□□□ 0.31
CHEK2-201ENST00000328354 LARGE1O95461 756 aa16.96■□□□□ 0.31
CHEK2-201ENST00000328354 EN1Q05925 392 aaPredicted RBP16.96■□□□□ 0.31
CHEK2-201ENST00000328354 TOB2Q14106 344 aaPredicted RBP16.96■□□□□ 0.31
CHEK2-201ENST00000328354 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.31
CHEK2-201ENST00000328354 STOX1Q6ZVD7 989 aa16.96■□□□□ 0.31
CHEK2-201ENST00000328354 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.31
CHEK2-201ENST00000328354 ZNF532Q9HCE3 1301 aa16.95■□□□□ 0.3
CHEK2-201ENST00000328354 BRD1O95696 1058 aa16.95■□□□□ 0.3
CHEK2-201ENST00000328354 APBA3O96018 575 aa16.95■□□□□ 0.3
CHEK2-201ENST00000328354 MAP3K12Q12852 859 aa16.95■□□□□ 0.3
CHEK2-201ENST00000328354 CCDC24Q8N4L8 307 aa16.95■□□□□ 0.3
CHEK2-201ENST00000328354 TPCN1Q9ULQ1 816 aa16.95■□□□□ 0.3
CHEK2-201ENST00000328354 NPHP1O15259 732 aa16.95■□□□□ 0.3
CHEK2-201ENST00000328354 PTMSP20962 102 aa16.95■□□□□ 0.3
CHEK2-201ENST00000328354 ME3Q16798 604 aa16.95■□□□□ 0.3
CHEK2-201ENST00000328354 LARP6Q9BRS8 491 aaKnown RBP16.95■□□□□ 0.3
CHEK2-201ENST00000328354 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
CHEK2-201ENST00000328354 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
CHEK2-201ENST00000328354 BAG6P46379 1132 aa16.94■□□□□ 0.3
CHEK2-201ENST00000328354 GRAPQ13588 217 aa16.94■□□□□ 0.3
CHEK2-201ENST00000328354 CAVIN4Q5BKX8 364 aa16.94■□□□□ 0.3
CHEK2-201ENST00000328354 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
CHEK2-201ENST00000328354 E7EWF7 191 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 FGAP02671 866 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 ST3GAL1Q11201 340 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 FBXO33Q7Z6M2 555 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 FAM84BQ96KN1 310 aaPredicted RBP16.93■□□□□ 0.3
CHEK2-201ENST00000328354 COL1A1P02452 1464 aaPredicted RBP16.93■□□□□ 0.3
CHEK2-201ENST00000328354 PDS5AQ29RF7 1337 aaKnown RBP16.93■□□□□ 0.3
CHEK2-201ENST00000328354 SEMA3EO15041 775 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 SERPINB2P05120 415 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 GYG1P46976 350 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
CHEK2-201ENST00000328354 AKT1S1Q96B36 256 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 TCEANC2Q96MN5 208 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 AGXT2Q9BYV1 514 aa16.93■□□□□ 0.3
CHEK2-201ENST00000328354 NRXN2Q9P2S2 1712 aa16.92■□□□□ 0.3
CHEK2-201ENST00000328354 CACNA1SQ13698 1873 aa16.92■□□□□ 0.3
CHEK2-201ENST00000328354 A0A0G2JLW4 131 aa16.92■□□□□ 0.3
CHEK2-201ENST00000328354 WTIPA6NIX2 430 aaPredicted RBP16.92■□□□□ 0.3
CHEK2-201ENST00000328354 EXOSC10Q01780 885 aaKnown RBP16.92■□□□□ 0.3
CHEK2-201ENST00000328354 IMMTQ16891 758 aaKnown RBP16.92■□□□□ 0.3
CHEK2-201ENST00000328354 TTLL5Q6EMB2 1281 aa16.92■□□□□ 0.3
CHEK2-201ENST00000328354 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
CHEK2-201ENST00000328354 ZMYM6O95789 1325 aa16.91■□□□□ 0.3
CHEK2-201ENST00000328354 IRS2Q9Y4H2 1338 aa16.91■□□□□ 0.3
CHEK2-201ENST00000328354 ST5P78524 1137 aa16.91■□□□□ 0.3
CHEK2-201ENST00000328354 EZH2Q15910 746 aaKnown RBP16.91■□□□□ 0.3
CHEK2-201ENST00000328354 FBXL16Q8N461 479 aa16.91■□□□□ 0.3
CHEK2-201ENST00000328354 MAGEB6Q8N7X4 407 aa16.91■□□□□ 0.3
CHEK2-201ENST00000328354 STRBPQ96SI9 672 aaKnown RBP16.91■□□□□ 0.3
CHEK2-201ENST00000328354 DENND2AQ9ULE3 1009 aa16.91■□□□□ 0.3
CHEK2-201ENST00000328354 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
CHEK2-201ENST00000328354 DDR1Q08345 913 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 ALX1Q15699 326 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 ZNF827Q17R98 1081 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 Q6ZUG5 572 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 SMC3Q9UQE7 1217 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 CHD4Q14839 1912 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 GOLGA6L22H0YM25 854 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 GSE1Q14687 1217 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 AIDAQ96BJ3 306 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 CAMKK2Q96RR4 588 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 PNPLA7Q6ZV29 1317 aa16.9■□□□□ 0.3
CHEK2-201ENST00000328354 WDR33Q9C0J8 1336 aaKnown RBP16.9■□□□□ 0.3
CHEK2-201ENST00000328354 ANKRD31Q8N7Z5 1873 aa16.89■□□□□ 0.29
CHEK2-201ENST00000328354 KLRG2A4D1S0 409 aaPredicted RBP16.89■□□□□ 0.29
CHEK2-201ENST00000328354 TRAK2O60296 914 aa16.89■□□□□ 0.29
CHEK2-201ENST00000328354 VPS37DQ86XT2 251 aa16.89■□□□□ 0.29
CHEK2-201ENST00000328354 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
CHEK2-201ENST00000328354 TFCP2L1Q9NZI6 479 aa16.88■□□□□ 0.29
CHEK2-201ENST00000328354 LRP2BPQ9P2M1 347 aa16.88■□□□□ 0.29
CHEK2-201ENST00000328354 LEMD3Q9Y2U8 911 aa16.88■□□□□ 0.29
CHEK2-201ENST00000328354 KLRK1P26718 216 aa16.88■□□□□ 0.29
CHEK2-201ENST00000328354 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
CHEK2-201ENST00000328354 SKOR2Q2VWA4 1001 aaPredicted RBP16.88■□□□□ 0.29
CHEK2-201ENST00000328354 CCDC88AQ3V6T2 1871 aa16.88■□□□□ 0.29
CHEK2-201ENST00000328354 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
CHEK2-201ENST00000328354 RPGRQ92834 1020 aaKnown RBP16.88■□□□□ 0.29
CHEK2-201ENST00000328354 IQSEC3Q9UPP2 1182 aaPredicted RBP16.88■□□□□ 0.29
CHEK2-201ENST00000328354 MAST2Q6P0Q8 1798 aa16.88■□□□□ 0.29
CHEK2-201ENST00000328354 LRRC37AA6NMS7 1700 aa16.87■□□□□ 0.29
CHEK2-201ENST00000328354 TCHHQ07283 1943 aa16.87■□□□□ 0.29
CHEK2-201ENST00000328354 PATL2C9JE40 543 aaKnown RBP16.87■□□□□ 0.29
CHEK2-201ENST00000328354 ZNF213O14771 459 aa16.87■□□□□ 0.29
CHEK2-201ENST00000328354 MBD4O95243 580 aa16.87■□□□□ 0.29
CHEK2-201ENST00000328354 PDIA4P13667 645 aaKnown RBP16.87■□□□□ 0.29
CHEK2-201ENST00000328354 GNAT2P19087 354 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms