RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 LRRC24Q50LG9 513 aa6.26□□□□□ -1.41
LRIT3-201ENST00000327908 BMP2KLQ5H9B9 411 aa6.26□□□□□ -1.41
LRIT3-201ENST00000327908 FKBP1CQ5VVH2 108 aa6.26□□□□□ -1.41
LRIT3-201ENST00000327908 C3orf67Q6ZVT6 689 aa6.26□□□□□ -1.41
LRIT3-201ENST00000327908 SMIM5Q71RC9 77 aa6.26□□□□□ -1.41
LRIT3-201ENST00000327908 SIRT2Q8IXJ6 389 aa6.26□□□□□ -1.41
LRIT3-201ENST00000327908 MTMR14Q8NCE2 650 aa6.26□□□□□ -1.41
LRIT3-201ENST00000327908 GINM1Q9NU53 330 aa6.26□□□□□ -1.41
LRIT3-201ENST00000327908 H7C1D1 291 aa6.25□□□□□ -1.41
LRIT3-201ENST00000327908 LDHBP07195 334 aaKnown RBP6.25□□□□□ -1.41
LRIT3-201ENST00000327908 CCDC102BQ68D86 513 aa6.25□□□□□ -1.41
LRIT3-201ENST00000327908 JARID2Q92833 1246 aaPredicted RBP6.25□□□□□ -1.41
LRIT3-201ENST00000327908 PA2G4Q9UQ80 394 aaKnown RBP6.25□□□□□ -1.41
LRIT3-201ENST00000327908 COL2A1P02458 1487 aaPredicted RBP6.25□□□□□ -1.41
LRIT3-201ENST00000327908 FZD9O00144 591 aa6.25□□□□□ -1.41
LRIT3-201ENST00000327908 UBE3CQ15386 1083 aa6.25□□□□□ -1.41
LRIT3-201ENST00000327908 HHIPL2Q6UWX4 724 aa6.25□□□□□ -1.41
LRIT3-201ENST00000327908 PNMA8AQ86V59 439 aaPredicted RBP6.25□□□□□ -1.41
LRIT3-201ENST00000327908 DZIP1Q86YF9 867 aaKnown RBP6.25□□□□□ -1.41
LRIT3-201ENST00000327908 SPATA5Q8NB90 893 aa6.25□□□□□ -1.41
LRIT3-201ENST00000327908 FAM163AQ96GL9 167 aaPredicted RBP6.25□□□□□ -1.41
LRIT3-201ENST00000327908 ZNF594Q96JF6 807 aaPredicted RBP6.25□□□□□ -1.41
LRIT3-201ENST00000327908 L3MBTL3Q96JM7 780 aaPredicted RBP6.25□□□□□ -1.41
LRIT3-201ENST00000327908 SERPINA10Q9UK55 444 aa6.25□□□□□ -1.41
LRIT3-201ENST00000327908 PITPNM2Q9BZ72 1349 aa6.25□□□□□ -1.41
LRIT3-201ENST00000327908 MYH13Q9UKX3 1938 aa6.25□□□□□ -1.41
LRIT3-201ENST00000327908 UNCXA6NJT0 531 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 VIL1P09327 827 aaKnown RBP6.24□□□□□ -1.41
LRIT3-201ENST00000327908 PDE1AP54750 535 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 GIMAP6Q6P9H5 292 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 RSBN1LQ6PCB5 846 aaPredicted RBP6.24□□□□□ -1.41
LRIT3-201ENST00000327908 ZC3H15Q8WU90 426 aaKnown RBP6.24□□□□□ -1.41
LRIT3-201ENST00000327908 CCDC85AQ96PX6 553 aaPredicted RBP6.24□□□□□ -1.41
LRIT3-201ENST00000327908 PDGFDQ9GZP0 370 aaPredicted RBP6.24□□□□□ -1.41
LRIT3-201ENST00000327908 ZNF287Q9HBT7 754 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 HELLSQ9NRZ9 838 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 PCP11498 1178 aaKnown RBP6.24□□□□□ -1.41
LRIT3-201ENST00000327908 APOBEC3FQ8IUX4 373 aaKnown RBP6.24□□□□□ -1.41
LRIT3-201ENST00000327908 NLGN2Q8NFZ4 835 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 CHMP4CQ96CF2 233 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 FAM84BQ96KN1 310 aaPredicted RBP6.24□□□□□ -1.41
LRIT3-201ENST00000327908 RNF181Q9P0P0 153 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 CACNA1SQ13698 1873 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 TIAM2Q8IVF5 1701 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 USP50Q70EL3 339 aaPredicted RBP6.24□□□□□ -1.41
LRIT3-201ENST00000327908 KBTBD3Q8NAB2 608 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 TEKT1Q969V4 418 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 PUS3Q9BZE2 481 aaKnown RBP6.24□□□□□ -1.41
LRIT3-201ENST00000327908 NACAP1Q9BZK3 213 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 PAG1Q9NWQ8 432 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 IRS2Q9Y4H2 1338 aa6.24□□□□□ -1.41
LRIT3-201ENST00000327908 NFKBIEO00221 500 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 CDC45O75419 566 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 SLC3A2P08195 630 aaKnown RBP6.23□□□□□ -1.41
LRIT3-201ENST00000327908 MCCP23508 829 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 TTC22Q5TAA0 569 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 UPF2Q9HAU5 1272 aaKnown RBP6.23□□□□□ -1.41
LRIT3-201ENST00000327908 DIAPH3Q9NSV4 1193 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 LRP2BPQ9P2M1 347 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 POLLQ9UGP5 575 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 CTNNA3Q9UI47 895 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 SCN4AP35499 1836 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 REC8O95072 547 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 CCDC178Q5BJE1 867 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 TTLL5Q6EMB2 1281 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 EAF2Q96CJ1 260 aaPredicted RBP6.23□□□□□ -1.41
LRIT3-201ENST00000327908 TBC1D2Q9BYX2 928 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 WDR90Q96KV7 1748 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 ZMYM6O95789 1325 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 SALL3Q9BXA9 1300 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 ZNF280AP59817 542 aaPredicted RBP6.23□□□□□ -1.41
LRIT3-201ENST00000327908 C9orf131Q5VYM1 1079 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 NAA16Q6N069 864 aaPredicted RBP6.23□□□□□ -1.41
LRIT3-201ENST00000327908 CCDC24Q8N4L8 307 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 DBNDD2Q9BQY9 259 aa6.23□□□□□ -1.41
LRIT3-201ENST00000327908 CRNKL1Q9BZJ0 848 aaKnown RBP6.23□□□□□ -1.41
LRIT3-201ENST00000327908 DBNLQ9UJU6 430 aaKnown RBP6.23□□□□□ -1.41
LRIT3-201ENST00000327908 KIAA1211Q6ZU35 1233 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 APPBP2Q92624 585 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 FSD1Q9BTV5 496 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 LNPKQ9C0E8 428 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 ADARB2Q9NS39 739 aaKnown RBP6.22□□□□□ -1.41
LRIT3-201ENST00000327908 HACL1Q9UJ83 578 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 CCDC88AQ3V6T2 1871 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 CHD4Q14839 1912 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 GLTPD2A6NH11 291 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 PPP4CP60510 307 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 AOC3Q16853 763 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 RNF113AO15541 343 aaKnown RBP6.22□□□□□ -1.41
LRIT3-201ENST00000327908 USP17L8P0C7I0 530 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 NF2P35240 595 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 MFSD14BQ5SR56 506 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 PLEKHM2Q8IWE5 1019 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 C16orf71Q8IYS4 520 aaPredicted RBP6.22□□□□□ -1.41
LRIT3-201ENST00000327908 CCDC8Q9H0W5 538 aaPredicted RBP6.22□□□□□ -1.41
LRIT3-201ENST00000327908 IL1RAPL2Q9NP60 686 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 RAI14Q9P0K7 980 aa6.22□□□□□ -1.41
LRIT3-201ENST00000327908 ENTPD3O75355 529 aa6.21□□□□□ -1.41
LRIT3-201ENST00000327908 TAF5LO75529 589 aa6.21□□□□□ -1.41
LRIT3-201ENST00000327908 IGHDP01880 384 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms