RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 CCDC125Q86Z20 511 aa12.2□□□□□ -0.46
ABCF1-201ENST00000326195 DDX41Q9UJV9 622 aaKnown RBP12.2□□□□□ -0.46
ABCF1-201ENST00000326195 CHGBP05060 677 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 SSH3Q8TE77 659 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 DPEP1P16444 411 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 MX1P20591 662 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 KLRK1P26718 216 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 TM4SF1P30408 202 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 PDE1AP54750 535 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 DOK7Q18PE1 504 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 EYA2O00167 538 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 TRIM28Q13263 835 aaKnown RBP12.19□□□□□ -0.46
ABCF1-201ENST00000326195 USP48Q86UV5 1035 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 NLGN2Q8NFZ4 835 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 ABCF2Q9UG63 623 aa12.19□□□□□ -0.46
ABCF1-201ENST00000326195 F8W031 263 aaPredicted RBP12.18□□□□□ -0.46
ABCF1-201ENST00000326195 BRD1O95696 1058 aa12.18□□□□□ -0.46
ABCF1-201ENST00000326195 CHRNDQ07001 517 aa12.18□□□□□ -0.46
ABCF1-201ENST00000326195 CDC5LQ99459 802 aaKnown RBP12.18□□□□□ -0.46
ABCF1-201ENST00000326195 GABPB1Q06547 395 aaPredicted RBP12.18□□□□□ -0.46
ABCF1-201ENST00000326195 STK11IPQ8N1F8 1099 aa12.18□□□□□ -0.46
ABCF1-201ENST00000326195 DIAPH3Q9NSV4 1193 aa12.18□□□□□ -0.46
ABCF1-201ENST00000326195 TCHHQ07283 1943 aa12.18□□□□□ -0.46
ABCF1-201ENST00000326195 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
ABCF1-201ENST00000326195 A0A1B0GUL7 405 aa12.17□□□□□ -0.46
ABCF1-201ENST00000326195 BCAMP50895 628 aa12.17□□□□□ -0.46
ABCF1-201ENST00000326195 KIF1BPQ96EK5 621 aa12.17□□□□□ -0.46
ABCF1-201ENST00000326195 TMX3Q96JJ7 454 aa12.17□□□□□ -0.46
ABCF1-201ENST00000326195 ZFP91Q96JP5 570 aaPredicted RBP12.17□□□□□ -0.46
ABCF1-201ENST00000326195 KDM4AO75164 1064 aa12.17□□□□□ -0.46
ABCF1-201ENST00000326195 SLC4A8Q2Y0W8 1093 aa12.17□□□□□ -0.46
ABCF1-201ENST00000326195 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
ABCF1-201ENST00000326195 UPF3BQ9BZI7 483 aaKnown RBP12.17□□□□□ -0.46
ABCF1-201ENST00000326195 UFL1O94874 794 aa12.16□□□□□ -0.46
ABCF1-201ENST00000326195 MORC2Q9Y6X9 1032 aaPredicted RBP12.16□□□□□ -0.46
ABCF1-201ENST00000326195 KIF18AQ8NI77 898 aa12.16□□□□□ -0.46
ABCF1-201ENST00000326195 SPON1Q9HCB6 807 aa12.16□□□□□ -0.46
ABCF1-201ENST00000326195 SIPA1L3O60292 1781 aaPredicted RBP12.16□□□□□ -0.46
ABCF1-201ENST00000326195 TXNRD3Q86VQ6 643 aa12.16□□□□□ -0.46
ABCF1-201ENST00000326195 TIGD1Q96MW7 591 aa12.16□□□□□ -0.46
ABCF1-201ENST00000326195 TRIM34Q9BYJ4 488 aa12.16□□□□□ -0.46
ABCF1-201ENST00000326195 FHDC1Q9C0D6 1143 aaPredicted RBP12.16□□□□□ -0.46
ABCF1-201ENST00000326195 TULP2O00295 520 aa12.15□□□□□ -0.46
ABCF1-201ENST00000326195 MCM2P49736 904 aa12.15□□□□□ -0.46
ABCF1-201ENST00000326195 WASHC4Q2M389 1173 aa12.15□□□□□ -0.46
ABCF1-201ENST00000326195 UVSSAQ2YD98 709 aa12.15□□□□□ -0.46
ABCF1-201ENST00000326195 C16orf45Q96MC5 204 aaPredicted RBP12.15□□□□□ -0.46
ABCF1-201ENST00000326195 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
ABCF1-201ENST00000326195 RFX5P48382 616 aaPredicted RBP12.15□□□□□ -0.46
ABCF1-201ENST00000326195 TTC39AQ5SRH9 613 aa12.15□□□□□ -0.46
ABCF1-201ENST00000326195 ATG9AQ7Z3C6 839 aa12.15□□□□□ -0.46
ABCF1-201ENST00000326195 GPATCH3Q96I76 525 aa12.15□□□□□ -0.46
ABCF1-201ENST00000326195 WNK3Q9BYP7 1800 aa12.15□□□□□ -0.46
ABCF1-201ENST00000326195 ATP10DQ9P241 1426 aa12.15□□□□□ -0.46
ABCF1-201ENST00000326195 SBF2Q86WG5 1849 aa12.15□□□□□ -0.47
ABCF1-201ENST00000326195 GOLIM4O00461 696 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 DTNBO60941 627 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 LRMPQ12912 555 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 SYAP1Q96A49 352 aaPredicted RBP12.14□□□□□ -0.47
ABCF1-201ENST00000326195 RBM17Q96I25 401 aaKnown RBP12.14□□□□□ -0.47
ABCF1-201ENST00000326195 DBNDD1Q9H9R9 158 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.14□□□□□ -0.47
ABCF1-201ENST00000326195 MINPP1Q9UNW1 487 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 V9GYY5 206 aaPredicted RBP12.14□□□□□ -0.47
ABCF1-201ENST00000326195 IDH1O75874 414 aaKnown RBP12.14□□□□□ -0.47
ABCF1-201ENST00000326195 PHKA1P46020 1223 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 PRPF40BQ6NWY9 871 aaKnown RBP12.14□□□□□ -0.47
ABCF1-201ENST00000326195 XAGE2Q96GT9 111 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 DBNLQ9UJU6 430 aaKnown RBP12.14□□□□□ -0.47
ABCF1-201ENST00000326195 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 C4BP0C0L5 1744 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 PTGS1P23219 599 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 PDE6BP35913 854 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 TNNI3KQ59H18 835 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 FPGT-TNNI3KV9GXZ4 949 aa12.14□□□□□ -0.47
ABCF1-201ENST00000326195 IL15P40933 162 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-201ENST00000326195 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 CSF1RP07333 972 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 POLA2Q14181 598 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 HSP90AB4PQ58FF6 505 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 ARHGAP27Q6ZUM4 889 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 CHMP4CQ96CF2 233 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 MXD3Q9BW11 206 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 HSP90B1P14625 803 aaKnown RBP12.13□□□□□ -0.47
ABCF1-201ENST00000326195 RABL6Q3YEC7 729 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-201ENST00000326195 KMT5BQ4FZB7 885 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 CNTROBQ8N137 903 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 FAM184AQ8NB25 1140 aa12.13□□□□□ -0.47
ABCF1-201ENST00000326195 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-201ENST00000326195 SRGNP10124 158 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 GPSM2P81274 684 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 SCARF1Q14162 830 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 DPP8Q6V1X1 898 aaPredicted RBP12.12□□□□□ -0.47
ABCF1-201ENST00000326195 COPRSQ9NQ92 184 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 SCAF8Q9UPN6 1271 aaKnown RBP12.12□□□□□ -0.47
ABCF1-201ENST00000326195 ADAMTS7Q9UKP4 1686 aa12.12□□□□□ -0.47
ABCF1-201ENST00000326195 PPEF1O14829 653 aaPredicted RBP12.12□□□□□ -0.47
ABCF1-201ENST00000326195 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms