RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 AKT1S1Q96B36 256 aa15.52■□□□□ 0.07
CPNE1-201ENST00000317677 MTFR1LQ9H019 292 aa15.52■□□□□ 0.07
CPNE1-201ENST00000317677 RTCBQ9Y3I0 505 aaKnown RBP15.52■□□□□ 0.07
CPNE1-201ENST00000317677 MROH5Q6ZUA9 1318 aa15.52■□□□□ 0.07
CPNE1-201ENST00000317677 FKBP4Q02790 459 aaKnown RBP eCLIP15.51■□□□□ 0.07
CPNE1-201ENST00000317677 ZNF827Q17R98 1081 aa15.51■□□□□ 0.07
CPNE1-201ENST00000317677 MCMDC2Q4G0Z9 681 aa15.51■□□□□ 0.07
CPNE1-201ENST00000317677 GORABQ5T7V8 394 aa15.51■□□□□ 0.07
CPNE1-201ENST00000317677 PRIMPOLQ96LW4 560 aa15.51■□□□□ 0.07
CPNE1-201ENST00000317677 PDGFDQ9GZP0 370 aaPredicted RBP15.51■□□□□ 0.07
CPNE1-201ENST00000317677 TFCP2L1Q9NZI6 479 aa15.51■□□□□ 0.07
CPNE1-201ENST00000317677 PHKA1P46020 1223 aa15.51■□□□□ 0.07
CPNE1-201ENST00000317677 SF3B3Q15393 1217 aaKnown RBP15.51■□□□□ 0.07
CPNE1-201ENST00000317677 SLC10A5Q5PT55 438 aa15.51■□□□□ 0.07
CPNE1-201ENST00000317677 CCDC39Q9UFE4 941 aa15.51■□□□□ 0.07
CPNE1-201ENST00000317677 LAMA4Q16363 1823 aa15.5■□□□□ 0.07
CPNE1-201ENST00000317677 MCM2P49736 904 aa15.5■□□□□ 0.07
CPNE1-201ENST00000317677 PUM3Q15397 648 aaKnown RBP15.5■□□□□ 0.07
CPNE1-201ENST00000317677 VPS53Q5VIR6 699 aa15.5■□□□□ 0.07
CPNE1-201ENST00000317677 ZNF512BQ96KM6 892 aaPredicted RBP15.5■□□□□ 0.07
CPNE1-201ENST00000317677 JAKMIP1Q96N16 626 aaKnown RBP15.5■□□□□ 0.07
CPNE1-201ENST00000317677 ZSWIM6Q9HCJ5 1215 aa15.5■□□□□ 0.07
CPNE1-201ENST00000317677 MAST3O60307 1309 aa15.5■□□□□ 0.07
CPNE1-201ENST00000317677 DOCK2Q92608 1830 aa15.5■□□□□ 0.07
CPNE1-201ENST00000317677 M0R2C6 588 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 RNF113AO15541 343 aaKnown RBP15.49■□□□□ 0.07
CPNE1-201ENST00000317677 PHF14O94880 888 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 CASTP20810 708 aaKnown RBP15.49■□□□□ 0.07
CPNE1-201ENST00000317677 SSFA2P28290 1259 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 AK2P54819 239 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 HMGN5P82970 282 aaKnown RBP15.49■□□□□ 0.07
CPNE1-201ENST00000317677 PKP1Q13835 747 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 CCDC102BQ68D86 513 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 RUFY3Q7L099 469 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 CCDC24Q8N4L8 307 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 LPIN2Q92539 896 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 TM6SF1Q9BZW5 370 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 HELLSQ9NRZ9 838 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-201ENST00000317677 ZPR1O75312 459 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 CYP2E1P05181 493 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-201ENST00000317677 ARID4AP29374 1257 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-201ENST00000317677 TICAM2Q86XR7 235 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 SLC16A10Q8TF71 515 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 OSBP2Q969R2 916 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 MPHOSPH8Q99549 860 aa15.49■□□□□ 0.07
CPNE1-201ENST00000317677 LARP6Q9BRS8 491 aaKnown RBP15.49■□□□□ 0.07
CPNE1-201ENST00000317677 KCNJ4P48050 445 aa15.48■□□□□ 0.07
CPNE1-201ENST00000317677 A0A0G2JLW4 131 aa15.47■□□□□ 0.07
CPNE1-201ENST00000317677 WTIPA6NIX2 430 aaPredicted RBP15.47■□□□□ 0.07
CPNE1-201ENST00000317677 FOXP2O15409 715 aa15.47■□□□□ 0.07
CPNE1-201ENST00000317677 LARGE1O95461 756 aa15.47■□□□□ 0.07
CPNE1-201ENST00000317677 HSP90B1P14625 803 aaKnown RBP15.47■□□□□ 0.07
CPNE1-201ENST00000317677 CHRNDQ07001 517 aa15.47■□□□□ 0.07
CPNE1-201ENST00000317677 SETDB2Q96T68 719 aa15.47■□□□□ 0.07
CPNE1-201ENST00000317677 PIH1D3Q9NQM4 214 aaKnown RBP15.47■□□□□ 0.07
CPNE1-201ENST00000317677 DCAF8L1A6NGE4 600 aa15.47■□□□□ 0.07
CPNE1-201ENST00000317677 IGHMBP2P38935 993 aaKnown RBP15.47■□□□□ 0.07
CPNE1-201ENST00000317677 TSGA10IPQ3SY00 556 aa15.47■□□□□ 0.07
CPNE1-201ENST00000317677 CELF1Q92879 486 aaKnown RBP15.47■□□□□ 0.07
CPNE1-201ENST00000317677 PNPLA7Q6ZV29 1317 aa15.46■□□□□ 0.07
CPNE1-201ENST00000317677 PTGER2P43116 358 aa15.46■□□□□ 0.07
CPNE1-201ENST00000317677 TRAPPC3LQ5T215 181 aa15.46■□□□□ 0.07
CPNE1-201ENST00000317677 ZDHHC9Q9Y397 364 aa15.46■□□□□ 0.07
CPNE1-201ENST00000317677 CYP21A2P08686 494 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 NBPF5PQ86XG9 351 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-201ENST00000317677 NYXQ9GZU5 481 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 HMG20BQ9P0W2 317 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 DDX49Q9Y6V7 483 aaKnown RBP15.45■□□□□ 0.06
CPNE1-201ENST00000317677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.45■□□□□ 0.06
CPNE1-201ENST00000317677 SLC5A1P13866 664 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 ZKSCAN1P17029 563 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-201ENST00000317677 RFC4P35249 363 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 ST3GAL1Q11201 340 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 NFIXQ14938 502 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 STOX1Q6ZVD7 989 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 FLAD1Q8NFF5 587 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 CDC5LQ99459 802 aaKnown RBP15.45■□□□□ 0.06
CPNE1-201ENST00000317677 CWC22Q9HCG8 908 aaKnown RBP15.45■□□□□ 0.06
CPNE1-201ENST00000317677 PDRG1Q9NUG6 133 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 CYP46A1Q9Y6A2 500 aa15.45■□□□□ 0.06
CPNE1-201ENST00000317677 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-201ENST00000317677 HSPD1P10809 573 aaKnown RBP15.44■□□□□ 0.06
CPNE1-201ENST00000317677 POLD1P28340 1107 aa15.44■□□□□ 0.06
CPNE1-201ENST00000317677 RASGRF1Q13972 1273 aa15.44■□□□□ 0.06
CPNE1-201ENST00000317677 ZNF710Q8N1W2 664 aa15.44■□□□□ 0.06
CPNE1-201ENST00000317677 INTS4Q96HW7 963 aaKnown RBP15.44■□□□□ 0.06
CPNE1-201ENST00000317677 DSCC1Q9BVC3 393 aa15.44■□□□□ 0.06
CPNE1-201ENST00000317677 PUS7LQ9H0K6 701 aaKnown RBP15.44■□□□□ 0.06
CPNE1-201ENST00000317677 UQCRFS1P1P0C7P4 283 aa15.44■□□□□ 0.06
CPNE1-201ENST00000317677 TM4SF1P30408 202 aa15.44■□□□□ 0.06
CPNE1-201ENST00000317677 ANKRD18AQ8IVF6 992 aa15.44■□□□□ 0.06
CPNE1-201ENST00000317677 TCEANC2Q96MN5 208 aa15.44■□□□□ 0.06
CPNE1-201ENST00000317677 RBSNQ9H1K0 784 aa15.44■□□□□ 0.06
CPNE1-201ENST00000317677 ADD2P35612 726 aa15.43■□□□□ 0.06
CPNE1-201ENST00000317677 BCAMP50895 628 aa15.43■□□□□ 0.06
CPNE1-201ENST00000317677 SLC20A2Q08357 652 aa15.43■□□□□ 0.06
CPNE1-201ENST00000317677 RNF20Q5VTR2 975 aa15.43■□□□□ 0.06
CPNE1-201ENST00000317677 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
CPNE1-201ENST00000317677 APPBP2Q92624 585 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms