RNA–Protein interactions for RNA: ENST00000311111.10

RPL38-201, Transcript of ribosomal protein L38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPL38, Length 1,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-201ENST00000311111 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
RPL38-201ENST00000311111 ZC3H12CQ9C0D7 883 aaKnown RBP12.73□□□□□ -0.37
RPL38-201ENST00000311111 EMILIN3Q9NT22 766 aa12.73□□□□□ -0.37
RPL38-201ENST00000311111 TM4SF4P48230 202 aa12.72□□□□□ -0.37
RPL38-201ENST00000311111 FXR1P51114 621 aaKnown RBP eCLIP12.72□□□□□ -0.37
RPL38-201ENST00000311111 RBM10P98175 930 aaKnown RBP12.72□□□□□ -0.37
RPL38-201ENST00000311111 SF3B3Q15393 1217 aaKnown RBP12.72□□□□□ -0.37
RPL38-201ENST00000311111 KRT24Q2M2I5 525 aa12.72□□□□□ -0.37
RPL38-201ENST00000311111 MYOZ2Q9NPC6 264 aa12.72□□□□□ -0.37
RPL38-201ENST00000311111 DLG5Q8TDM6 1919 aa12.72□□□□□ -0.37
RPL38-201ENST00000311111 KIAA0100Q14667 2235 aaKnown RBP12.72□□□□□ -0.37
RPL38-201ENST00000311111 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
RPL38-201ENST00000311111 RPS8P62241 208 aaKnown RBP12.71□□□□□ -0.37
RPL38-201ENST00000311111 IRX6P78412 446 aaPredicted RBP12.71□□□□□ -0.37
RPL38-201ENST00000311111 FLIIQ13045 1269 aa12.71□□□□□ -0.37
RPL38-201ENST00000311111 PRKG1Q13976 671 aa12.71□□□□□ -0.37
RPL38-201ENST00000311111 NOM1Q5C9Z4 860 aaKnown RBP12.71□□□□□ -0.37
RPL38-201ENST00000311111 AGBL3Q8NEM8 1001 aa12.71□□□□□ -0.37
RPL38-201ENST00000311111 GMLQ99445 158 aa12.71□□□□□ -0.37
RPL38-201ENST00000311111 SEC31BQ9NQW1 1179 aa12.71□□□□□ -0.37
RPL38-201ENST00000311111 TRIM17Q9Y577 477 aa12.71□□□□□ -0.37
RPL38-201ENST00000311111 TRIOBPQ9H2D6 2365 aa12.71□□□□□ -0.38
RPL38-201ENST00000311111 CEP290O15078 2479 aa12.7□□□□□ -0.38
RPL38-201ENST00000311111 PITPNM2Q9BZ72 1349 aa12.7□□□□□ -0.38
RPL38-201ENST00000311111 NCLP19338 710 aaKnown RBP12.7□□□□□ -0.38
RPL38-201ENST00000311111 PTPN12Q05209 780 aaKnown RBP12.7□□□□□ -0.38
RPL38-201ENST00000311111 NBPF9Q3BBW0 867 aa12.7□□□□□ -0.38
RPL38-201ENST00000311111 FRAT1Q92837 279 aaPredicted RBP12.7□□□□□ -0.38
RPL38-201ENST00000311111 ISCA1Q9BUE6 129 aa12.7□□□□□ -0.38
RPL38-201ENST00000311111 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
RPL38-201ENST00000311111 MXD3Q9BW11 206 aa12.7□□□□□ -0.38
RPL38-201ENST00000311111 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
RPL38-201ENST00000311111 ANKIB1Q9P2G1 1089 aa12.7□□□□□ -0.38
RPL38-201ENST00000311111 GGA1Q9UJY5 639 aa12.7□□□□□ -0.38
RPL38-201ENST00000311111 DDX60Q8IY21 1712 aaKnown RBP12.7□□□□□ -0.38
RPL38-201ENST00000311111 CENPFP49454 3210 aa12.69□□□□□ -0.38
RPL38-201ENST00000311111 MAPK8IP3Q9UPT6 1336 aa12.69□□□□□ -0.38
RPL38-201ENST00000311111 BRCA2P51587 3418 aa12.69□□□□□ -0.38
RPL38-201ENST00000311111 IRS4O14654 1257 aaPredicted RBP12.69□□□□□ -0.38
RPL38-201ENST00000311111 TPM2P07951 284 aa12.69□□□□□ -0.38
RPL38-201ENST00000311111 PDIA4P13667 645 aaKnown RBP12.69□□□□□ -0.38
RPL38-201ENST00000311111 SREBF2Q12772 1141 aa12.69□□□□□ -0.38
RPL38-201ENST00000311111 ZNF609O15014 1411 aa12.69□□□□□ -0.38
RPL38-201ENST00000311111 WTIPA6NIX2 430 aaPredicted RBP12.68□□□□□ -0.38
RPL38-201ENST00000311111 SASH1O94885 1247 aa12.68□□□□□ -0.38
RPL38-201ENST00000311111 EN2P19622 333 aaPredicted RBP12.68□□□□□ -0.38
RPL38-201ENST00000311111 CLCN1P35523 988 aa12.68□□□□□ -0.38
RPL38-201ENST00000311111 MAP2K5Q13163 448 aa12.68□□□□□ -0.38
RPL38-201ENST00000311111 NFKBIBQ15653 356 aa12.68□□□□□ -0.38
RPL38-201ENST00000311111 OTOP1Q7RTM1 612 aa12.68□□□□□ -0.38
RPL38-201ENST00000311111 CCDC85AQ96PX6 553 aaPredicted RBP12.68□□□□□ -0.38
RPL38-201ENST00000311111 PDCL3Q9H2J4 239 aa12.68□□□□□ -0.38
RPL38-201ENST00000311111 PNNQ9H307 717 aaKnown RBP12.68□□□□□ -0.38
RPL38-201ENST00000311111 FZD1Q9UP38 647 aa12.68□□□□□ -0.38
RPL38-201ENST00000311111 USP17L3A6NCW0 530 aa12.67□□□□□ -0.38
RPL38-201ENST00000311111 USP17L4A6NCW7 530 aa12.67□□□□□ -0.38
RPL38-201ENST00000311111 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.382e-10■□□□□ 9.1
RPL38-201ENST00000311111 USP17L1Q7RTZ2 530 aa12.67□□□□□ -0.38
RPL38-201ENST00000311111 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
RPL38-201ENST00000311111 CFHR5Q9BXR6 569 aa12.67□□□□□ -0.38
RPL38-201ENST00000311111 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
RPL38-201ENST00000311111 APBB1O00213 710 aa12.66□□□□□ -0.38
RPL38-201ENST00000311111 NF2P35240 595 aa12.66□□□□□ -0.38
RPL38-201ENST00000311111 RIPK4P57078 832 aa12.66□□□□□ -0.38
RPL38-201ENST00000311111 AMHR2Q16671 573 aa12.66□□□□□ -0.38
RPL38-201ENST00000311111 SPRYD7Q5W111 196 aa12.66□□□□□ -0.38
RPL38-201ENST00000311111 ANKRD13DQ6ZTN6 518 aa12.66□□□□□ -0.38
RPL38-201ENST00000311111 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
RPL38-201ENST00000311111 FBXW7Q969H0 707 aa12.66□□□□□ -0.38
RPL38-201ENST00000311111 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
RPL38-201ENST00000311111 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
RPL38-201ENST00000311111 SZT2Q5T011 3432 aa12.65□□□□□ -0.38
RPL38-201ENST00000311111 WNT10BO00744 389 aa12.65□□□□□ -0.38
RPL38-201ENST00000311111 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.38
RPL38-201ENST00000311111 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
RPL38-201ENST00000311111 ANGEL1Q9UNK9 670 aaKnown RBP12.65□□□□□ -0.38
RPL38-201ENST00000311111 IGF2BP3O00425 579 aaKnown RBP eCLIP12.64□□□□□ -0.393e-6■■■□□ 15.4
RPL38-201ENST00000311111 CAP1Q01518 475 aa12.64□□□□□ -0.39
RPL38-201ENST00000311111 DSG2Q14126 1118 aa12.64□□□□□ -0.39
RPL38-201ENST00000311111 HDGFL1Q5TGJ6 251 aa12.64□□□□□ -0.39
RPL38-201ENST00000311111 PARP9Q8IXQ6 854 aa12.64□□□□□ -0.39
RPL38-201ENST00000311111 CD99L2Q8TCZ2 262 aa12.64□□□□□ -0.39
RPL38-201ENST00000311111 CLMNQ96JQ2 1002 aa12.64□□□□□ -0.39
RPL38-201ENST00000311111 NAP1L5Q96NT1 182 aaPredicted RBP12.64□□□□□ -0.39
RPL38-201ENST00000311111 BACH2Q9BYV9 841 aa12.64□□□□□ -0.39
RPL38-201ENST00000311111 XDHP47989 1333 aa12.63□□□□□ -0.39
RPL38-201ENST00000311111 IRF6O14896 467 aa12.63□□□□□ -0.39
RPL38-201ENST00000311111 DACT2Q5SW24 774 aa12.63□□□□□ -0.39
RPL38-201ENST00000311111 LDLRAD1Q5T700 205 aa12.63□□□□□ -0.39
RPL38-201ENST00000311111 PODNQ7Z5L7 613 aa12.63□□□□□ -0.39
RPL38-201ENST00000311111 BABAM1Q9NWV8 329 aa12.63□□□□□ -0.39
RPL38-201ENST00000311111 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
RPL38-201ENST00000311111 ALDH1A1P00352 501 aa12.62□□□□□ -0.39
RPL38-201ENST00000311111 TAF7LQ5H9L4 462 aa12.62□□□□□ -0.39
RPL38-201ENST00000311111 OGFOD1Q8N543 542 aa12.62□□□□□ -0.39
RPL38-201ENST00000311111 ZBTB38Q8NAP3 1195 aaPredicted RBP12.62□□□□□ -0.39
RPL38-201ENST00000311111 ARMC5Q96C12 935 aa12.62□□□□□ -0.39
RPL38-201ENST00000311111 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
RPL38-201ENST00000311111 MANSC4A6NHS7 340 aaPredicted RBP12.61□□□□□ -0.39
RPL38-201ENST00000311111 ATP2B4P23634 1241 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms