RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 RPS8P62241 208 aaKnown RBP12.27□□□□□ -0.45
SYNPO2-201ENST00000307142 NECAB1Q8N987 351 aa12.27□□□□□ -0.45
SYNPO2-201ENST00000307142 TFIP11Q9UBB9 837 aaKnown RBP12.27□□□□□ -0.45
SYNPO2-201ENST00000307142 ASAP1Q9ULH1 1129 aa12.27□□□□□ -0.45
SYNPO2-201ENST00000307142 GADL1Q6ZQY3 521 aa12.27□□□□□ -0.45
SYNPO2-201ENST00000307142 LPIN2Q92539 896 aa12.27□□□□□ -0.45
SYNPO2-201ENST00000307142 PYM1Q9BRP8 204 aaKnown RBP12.27□□□□□ -0.45
SYNPO2-201ENST00000307142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.27□□□□□ -0.45
SYNPO2-201ENST00000307142 CEP152O94986 1710 aa12.27□□□□□ -0.45
SYNPO2-201ENST00000307142 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 BMP2KLQ5H9B9 411 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 GCKRQ14397 625 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 HSP90B2PQ58FF3 399 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 TAF4BQ92750 862 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 TGFBRAP1Q8WUH2 860 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 TCP10L2B9ZVM9 353 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 MRE11P49959 708 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 TNFAIP1Q13829 316 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 SPA17Q15506 151 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 USP48Q86UV5 1035 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 TEKT1Q969V4 418 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 ZBED4O75132 1171 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 TNNI3KQ59H18 835 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 FPGT-TNNI3KV9GXZ4 949 aa12.26□□□□□ -0.45
SYNPO2-201ENST00000307142 CERKQ8TCT0 537 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 TBC1D22AQ8WUA7 517 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 WDR70Q9NW82 654 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 CDC42BPGQ6DT37 1551 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 KRT2P35908 639 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 MFSD14BQ5SR56 506 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 ISM2Q6H9L7 571 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 HOMER2Q9NSB8 354 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 USP19O94966 1318 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 NOP56O00567 594 aaKnown RBP12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 RXRAP19793 462 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 HDAC1Q13547 482 aaPredicted RBP12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 STX6O43752 255 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 HOXB7P09629 217 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 ANO10Q9NW15 660 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 CCDC171Q6TFL3 1326 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 ROBO2Q9HCK4 1378 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 MYCLP12524 364 aaPredicted RBP12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 TAF12Q16514 161 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 BRINP3Q76B58 766 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 CERS3Q8IU89 383 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 ERCC4Q92889 916 aaPredicted RBP12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 ATP2B4P23634 1241 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 TEX35Q5T0J7 233 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 SYNCQ9H7C4 482 aa12.25□□□□□ -0.45
SYNPO2-201ENST00000307142 TNNT1P13805 278 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 SCNN1DP51172 638 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 EIF4A1P60842 406 aaKnown RBP12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 SETQ01105 290 aaPredicted RBP12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 CPXCR1Q8N123 301 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 SPATA5Q8NB90 893 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 THRAP3Q9Y2W1 955 aaKnown RBP12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 CALML3P27482 149 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 FCHSD1Q86WN1 690 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 MAPKAPK5Q8IW41 473 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 ESYT1Q9BSJ8 1104 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 DPH6Q7L8W6 267 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 ZNF354CQ86Y25 554 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 SUCLG2Q96I99 432 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 RBM28Q9NW13 759 aaKnown RBP12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 TET3O43151 1660 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 GNA11P29992 359 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 PAGR1Q9BTK6 254 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 DALRD3Q5D0E6 543 aaKnown RBP12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 FILIP1Q7Z7B0 1213 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 NUP88Q99567 741 aaPredicted RBP12.24□□□□□ -0.45
SYNPO2-201ENST00000307142 GBP2P32456 591 aaPredicted RBP12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 TDRD12Q587J7 1177 aaKnown RBP12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 TTLL7Q6ZT98 887 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 AS3MTQ9HBK9 375 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 BIN1O00499 593 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 USH1GQ495M9 461 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 CIZ1Q9ULV3 898 aaPredicted RBP12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 ABT1Q9ULW3 272 aaKnown RBP12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 KCNQ3O43525 872 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 SSFA2P28290 1259 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 MCM7P33993 719 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 KANK3Q6NY19 840 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 CTNNBL1Q8WYA6 563 aaPredicted RBP12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 KIFC2Q96AC6 838 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 HELLSQ9NRZ9 838 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 FAM135BQ49AJ0 1406 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 FAM13AO94988 1023 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 AFMP43652 599 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 SERPINB2P05120 415 aa12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 RBM27Q9P2N5 1060 aaKnown RBP12.23□□□□□ -0.45
SYNPO2-201ENST00000307142 MACROD2A1Z1Q3 448 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 SPHKAPQ2M3C7 1700 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 CNGA1P29973 690 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 AKNAD1Q5T1N1 836 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 INSRP06213 1382 aa12.22□□□□□ -0.45
SYNPO2-201ENST00000307142 CTNNA2P26232 953 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms