RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
TRUB1-201ENST00000298746 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
TRUB1-201ENST00000298746 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
TRUB1-201ENST00000298746 TADA3O75528 432 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 PDIA3P30101 505 aaKnown RBP13.13□□□□□ -0.31
TRUB1-201ENST00000298746 ADD1P35611 737 aaKnown RBP13.13□□□□□ -0.31
TRUB1-201ENST00000298746 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 COPS6Q7L5N1 327 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 PARD6BQ9BYG5 372 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 TMEM232C9JQI7 657 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 RHOXF2BP0C7M4 288 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 RXRAP19793 462 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 TIMM10P62072 90 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 TRDNQ13061 729 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 SPECC1Q5M775 1068 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 KLHL10Q6JEL2 608 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 CC2D1AQ6P1N0 951 aaPredicted RBP13.13□□□□□ -0.31
TRUB1-201ENST00000298746 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 RHOXF2Q9BQY4 288 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 PHLPP2Q6ZVD8 1323 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 E7EWF7 191 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 CTDNEP1O95476 244 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
TRUB1-201ENST00000298746 NFXL1Q6ZNB6 911 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 GPR161Q8N6U8 529 aaKnown RBP13.13□□□□□ -0.31
TRUB1-201ENST00000298746 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
TRUB1-201ENST00000298746 CLTCQ00610 1675 aaKnown RBP13.13□□□□□ -0.31
TRUB1-201ENST00000298746 TMEM131LA2VDJ0 1609 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 ARHGAP6O43182 974 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
TRUB1-201ENST00000298746 ATP5JP18859 108 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
TRUB1-201ENST00000298746 MPHOSPH8Q99549 860 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 RTEL1Q9NZ71 1219 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 A0A087WZG4 1122 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 MYO1CO00159 1063 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 ERLIN1O75477 346 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 WDR24Q96S15 920 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 ADAM21Q9UKJ8 722 aa13.12□□□□□ -0.31
TRUB1-201ENST00000298746 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
TRUB1-201ENST00000298746 A0A0G2JLW4 131 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 HOXB7P09629 217 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 IFIT1P09914 478 aaKnown RBP13.11□□□□□ -0.31
TRUB1-201ENST00000298746 PPFIBP1Q86W92 1011 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 ERBB3P21860 1342 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 CARMIL3Q8ND23 1372 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 ANKRD65E5RJM6 399 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 PES1O00541 588 aaKnown RBP13.11□□□□□ -0.31
TRUB1-201ENST00000298746 EPHA10Q5JZY3 1008 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 CCDC102BQ68D86 513 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
TRUB1-201ENST00000298746 PDE11AQ9HCR9 933 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 PAG1Q9NWQ8 432 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 HOOK1Q9UJC3 728 aaKnown RBP13.11□□□□□ -0.31
TRUB1-201ENST00000298746 KDRP35968 1356 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 RIMS1Q86UR5 1692 aaKnown RBP13.11□□□□□ -0.31
TRUB1-201ENST00000298746 KIF5CO60282 957 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 LONRF2Q1L5Z9 754 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 TRMT44Q8IYL2 757 aaKnown RBP13.11□□□□□ -0.31
TRUB1-201ENST00000298746 DHX58Q96C10 678 aa13.11□□□□□ -0.31
TRUB1-201ENST00000298746 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
TRUB1-201ENST00000298746 A0A1W2PQ27 194 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 A0A1W2PQ64 194 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 A0A1W2PQD8 194 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 GOLGA6L9A6NEM1 432 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 CHMP4BP1P59074 171 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 PSME1Q06323 249 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 IMMTQ16891 758 aaKnown RBP13.1□□□□□ -0.31
TRUB1-201ENST00000298746 TSGA10IPQ3SY00 556 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 PRC1O43663 620 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 SASH3O75995 380 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 CCDC82Q8N4S0 544 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 KBTBD3Q8NAB2 608 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 CLIC6Q96NY7 704 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
TRUB1-201ENST00000298746 PARP3Q9Y6F1 533 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
TRUB1-201ENST00000298746 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
TRUB1-201ENST00000298746 LMBR1LQ6UX01 489 aa13.1□□□□□ -0.31
TRUB1-201ENST00000298746 IRX2Q9BZI1 471 aaPredicted RBP13.1□□□□□ -0.31
TRUB1-201ENST00000298746 YEATS4O95619 227 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 ZNF827Q17R98 1081 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 AKAP4Q5JQC9 854 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 MICU3Q86XE3 530 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 ALG1Q9BT22 464 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 ZRANB2O95218 330 aaKnown RBP eCLIP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms