RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 COL1A1P02452 1464 aaPredicted RBP17.69■□□□□ 0.42
TPM1-202ENST00000288398 AKAP11Q9UKA4 1901 aa17.69■□□□□ 0.42
TPM1-202ENST00000288398 FKBP1AP62942 108 aaKnown RBP17.69■□□□□ 0.42
TPM1-202ENST00000288398 EPHA10Q5JZY3 1008 aa17.69■□□□□ 0.42
TPM1-202ENST00000288398 VPS37DQ86XT2 251 aa17.69■□□□□ 0.42
TPM1-202ENST00000288398 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.69■□□□□ 0.42
TPM1-202ENST00000288398 ANGEL1Q9UNK9 670 aaKnown RBP17.69■□□□□ 0.42
TPM1-202ENST00000288398 PPP2R3BQ9Y5P8 575 aa17.69■□□□□ 0.42
TPM1-202ENST00000288398 PPP1R12BO60237 982 aaPredicted RBP17.68■□□□□ 0.42
TPM1-202ENST00000288398 MKRN3Q13064 507 aaKnown RBP17.68■□□□□ 0.42
TPM1-202ENST00000288398 CFAP100Q494V2 611 aa17.68■□□□□ 0.42
TPM1-202ENST00000288398 DEFB129Q9H1M3 183 aa17.68■□□□□ 0.42
TPM1-202ENST00000288398 VEZTQ9HBM0 779 aa17.68■□□□□ 0.42
TPM1-202ENST00000288398 JAG2Q9Y219 1238 aa17.68■□□□□ 0.42
TPM1-202ENST00000288398 E9PSI1 815 aa17.67■□□□□ 0.42
TPM1-202ENST00000288398 FRAT2O75474 233 aaPredicted RBP17.67■□□□□ 0.42
TPM1-202ENST00000288398 HIBADHP31937 336 aaKnown RBP17.67■□□□□ 0.42
TPM1-202ENST00000288398 UBE4AQ14139 1066 aa17.67■□□□□ 0.42
TPM1-202ENST00000288398 SUPT20HL1Q3ZLR7 823 aa17.67■□□□□ 0.42
TPM1-202ENST00000288398 CERS5Q8N5B7 392 aa17.67■□□□□ 0.42
TPM1-202ENST00000288398 MTMR14Q8NCE2 650 aa17.67■□□□□ 0.42
TPM1-202ENST00000288398 SUCLG2Q96I99 432 aa17.67■□□□□ 0.42
TPM1-202ENST00000288398 PTPRCP08575 1304 aa17.67■□□□□ 0.42
TPM1-202ENST00000288398 MROH5Q6ZUA9 1318 aa17.67■□□□□ 0.42
TPM1-202ENST00000288398 CLRN2A0PK11 232 aa17.66■□□□□ 0.42
TPM1-202ENST00000288398 PTPN12Q05209 780 aaKnown RBP17.66■□□□□ 0.42
TPM1-202ENST00000288398 CTU1Q7Z7A3 348 aaKnown RBP17.66■□□□□ 0.42
TPM1-202ENST00000288398 ZBED3Q96IU2 234 aaPredicted RBP17.66■□□□□ 0.42
TPM1-202ENST00000288398 IRS2Q9Y4H2 1338 aa17.66■□□□□ 0.42
TPM1-202ENST00000288398 SPDYE2BA6NHP3 402 aa17.65■□□□□ 0.42
TPM1-202ENST00000288398 NBPF7P0C2Y1 421 aaPredicted RBP17.65■□□□□ 0.42
TPM1-202ENST00000288398 SPDYE6P0CI01 402 aa17.65■□□□□ 0.42
TPM1-202ENST00000288398 TNFAIP1Q13829 316 aa17.65■□□□□ 0.42
TPM1-202ENST00000288398 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
TPM1-202ENST00000288398 METTL24Q5JXM2 366 aa17.65■□□□□ 0.42
TPM1-202ENST00000288398 MFSD14BQ5SR56 506 aa17.65■□□□□ 0.42
TPM1-202ENST00000288398 SLC10A4Q96EP9 437 aa17.65■□□□□ 0.42
TPM1-202ENST00000288398 ZNF646O15015 1829 aaPredicted RBP17.65■□□□□ 0.42
TPM1-202ENST00000288398 GYG1P46976 350 aa17.64■□□□□ 0.41
TPM1-202ENST00000288398 MRPL50Q8N5N7 158 aaKnown RBP17.64■□□□□ 0.41
TPM1-202ENST00000288398 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
TPM1-202ENST00000288398 TTF2Q9UNY4 1162 aaKnown RBP17.64■□□□□ 0.41
TPM1-202ENST00000288398 TBC1D8O95759 1140 aa17.63■□□□□ 0.41
TPM1-202ENST00000288398 ALDH1A1P00352 501 aa17.63■□□□□ 0.41
TPM1-202ENST00000288398 IREB2P48200 963 aaKnown RBP17.63■□□□□ 0.41
TPM1-202ENST00000288398 TM4SF4P48230 202 aa17.63■□□□□ 0.41
TPM1-202ENST00000288398 PUS3Q9BZE2 481 aaKnown RBP17.63■□□□□ 0.41
TPM1-202ENST00000288398 FAM205AQ6ZU69 1335 aa17.63■□□□□ 0.41
TPM1-202ENST00000288398 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
TPM1-202ENST00000288398 A0A1B0GUL6 1792 aa17.62■□□□□ 0.41
TPM1-202ENST00000288398 PKN2Q16513 984 aaKnown RBP17.62■□□□□ 0.41
TPM1-202ENST00000288398 LDLRAD1Q5T700 205 aa17.62■□□□□ 0.41
TPM1-202ENST00000288398 SPRYD7Q5W111 196 aa17.62■□□□□ 0.41
TPM1-202ENST00000288398 TDRD7Q8NHU6 1098 aaKnown RBP17.62■□□□□ 0.41
TPM1-202ENST00000288398 PRMT6Q96LA8 375 aaPredicted RBP17.62■□□□□ 0.41
TPM1-202ENST00000288398 SERPINA10Q9UK55 444 aa17.62■□□□□ 0.41
TPM1-202ENST00000288398 UTYO14607 1347 aa17.62■□□□□ 0.41
TPM1-202ENST00000288398 MANSC4A6NHS7 340 aaPredicted RBP17.61■□□□□ 0.41
TPM1-202ENST00000288398 TNNI2P48788 182 aa17.61■□□□□ 0.41
TPM1-202ENST00000288398 RGS19P49795 217 aa17.61■□□□□ 0.41
TPM1-202ENST00000288398 INHBEP58166 350 aa17.61■□□□□ 0.41
TPM1-202ENST00000288398 CHAF1AQ13111 956 aaPredicted RBP17.61■□□□□ 0.41
TPM1-202ENST00000288398 TBC1D22AQ8WUA7 517 aa17.61■□□□□ 0.41
TPM1-202ENST00000288398 ZNF296Q8WUU4 475 aaPredicted RBP17.61■□□□□ 0.41
TPM1-202ENST00000288398 SMC4Q9NTJ3 1288 aa17.61■□□□□ 0.41
TPM1-202ENST00000288398 UNCXA6NJT0 531 aa17.6■□□□□ 0.41
TPM1-202ENST00000288398 ZBTB48P10074 688 aaPredicted RBP17.6■□□□□ 0.41
TPM1-202ENST00000288398 RASA3Q14644 834 aa17.6■□□□□ 0.41
TPM1-202ENST00000288398 RABL6Q3YEC7 729 aaPredicted RBP17.6■□□□□ 0.41
TPM1-202ENST00000288398 SSH1Q8WYL5 1049 aa17.6■□□□□ 0.41
TPM1-202ENST00000288398 FAM84BQ96KN1 310 aaPredicted RBP17.6■□□□□ 0.41
TPM1-202ENST00000288398 FZD1Q9UP38 647 aa17.6■□□□□ 0.41
TPM1-202ENST00000288398 RIPOR2Q9Y4F9 1068 aa17.6■□□□□ 0.41
TPM1-202ENST00000288398 PCDHAC2Q9Y5I4 1007 aa17.6■□□□□ 0.41
TPM1-202ENST00000288398 GPR25O00155 361 aa17.59■□□□□ 0.41
TPM1-202ENST00000288398 IFIT1P09914 478 aaKnown RBP17.59■□□□□ 0.41
TPM1-202ENST00000288398 MAP3K11Q16584 847 aa17.59■□□□□ 0.41
TPM1-202ENST00000288398 OTUD7BQ6GQQ9 843 aa17.59■□□□□ 0.41
TPM1-202ENST00000288398 KAZALD1Q96I82 304 aa17.59■□□□□ 0.41
TPM1-202ENST00000288398 ZNF70Q9UC06 446 aaPredicted RBP17.59■□□□□ 0.41
TPM1-202ENST00000288398 FKTNO75072 461 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 PDE8BO95263 885 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 CRKP46108 304 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 SOX10P56693 466 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 SLFN5Q08AF3 891 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 ALDH1L2Q3SY69 923 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 SPDYE2Q495Y8 402 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 LRRC24Q50LG9 513 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 NBPF12Q5TAG4 269 aaPredicted RBP17.58■□□□□ 0.4
TPM1-202ENST00000288398 ANKRD13AQ8IZ07 590 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 ANKRD44Q8N8A2 993 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 WNK4Q96J92 1243 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 TDRD3Q9H7E2 651 aaKnown RBP17.58■□□□□ 0.4
TPM1-202ENST00000288398 TMOD2Q9NZR1 351 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 IQSEC3Q9UPP2 1182 aaPredicted RBP17.58■□□□□ 0.4
TPM1-202ENST00000288398 ECM29Q5VYK3 1845 aa17.58■□□□□ 0.4
TPM1-202ENST00000288398 MAST3O60307 1309 aa17.57■□□□□ 0.4
TPM1-202ENST00000288398 PUM3Q15397 648 aaKnown RBP17.57■□□□□ 0.4
TPM1-202ENST00000288398 NOM1Q5C9Z4 860 aaKnown RBP17.57■□□□□ 0.4
TPM1-202ENST00000288398 DZIP1LQ8IYY4 767 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms