RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
SLC28A1-201ENST00000286749 CGNQ9P2M7 1197 aaKnown RBP15.44■□□□□ 0.06
SLC28A1-201ENST00000286749 CLIC4Q9Y696 253 aa15.44■□□□□ 0.06
SLC28A1-201ENST00000286749 COL18A1P39060 1754 aa15.44■□□□□ 0.06
SLC28A1-201ENST00000286749 A0A1B0GUL7 405 aa15.44■□□□□ 0.06
SLC28A1-201ENST00000286749 ADALQ6DHV7 355 aa15.44■□□□□ 0.06
SLC28A1-201ENST00000286749 C1orf167Q5SNV9 1468 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 PKD1L3Q7Z443 1732 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 EYA2O00167 538 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 HAND2P61296 217 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 STK38Q15208 465 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 SF3A1Q15459 793 aaKnown RBP15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 NBPF11Q86T75 865 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 CCAR2Q8N163 923 aaKnown RBP15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 OSBP2Q969R2 916 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 A0A1W2PQ27 194 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 A0A1W2PQ64 194 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 A0A1W2PQD8 194 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 POLR3DP05423 398 aaPredicted RBP15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 DPCR1Q3MIW9 517 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 LINC00301Q8NCQ3 95 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 PUS3Q9BZE2 481 aaKnown RBP15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 OGFRQ9NZT2 677 aa15.43■□□□□ 0.06
SLC28A1-201ENST00000286749 FKBP4Q02790 459 aaKnown RBP eCLIP15.42■□□□□ 0.06
SLC28A1-201ENST00000286749 RAB11FIP4Q86YS3 637 aa15.42■□□□□ 0.06
SLC28A1-201ENST00000286749 C8orf76Q96K31 380 aa15.42■□□□□ 0.06
SLC28A1-201ENST00000286749 ZNF215Q9UL58 517 aaPredicted RBP15.42■□□□□ 0.06
SLC28A1-201ENST00000286749 CHRNA2Q15822 529 aa15.42■□□□□ 0.06
SLC28A1-201ENST00000286749 DDX17Q92841 729 aaKnown RBP15.42■□□□□ 0.06
SLC28A1-201ENST00000286749 CHMP4CQ96CF2 233 aa15.42■□□□□ 0.06
SLC28A1-201ENST00000286749 KIAA1468Q9P260 1216 aa15.42■□□□□ 0.06
SLC28A1-201ENST00000286749 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.42■□□□□ 0.06
SLC28A1-201ENST00000286749 V9GYY5 206 aaPredicted RBP15.42■□□□□ 0.06
SLC28A1-201ENST00000286749 EVCP57679 992 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 GSDMDP57764 484 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 ZRSR1Q15695 479 aaKnown RBP15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 PROSER2Q86WR7 435 aaPredicted RBP15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 TICAM2Q86XR7 235 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 CABLES1Q8TDN4 633 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 ZBTB3Q9H5J0 574 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 GJB4Q9NTQ9 266 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 MST1RQ04912 1400 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 NEDD4P46934 1319 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 KLF18A0A0U1RQI7 1052 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 GOLGA8BA8MQT2 603 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 FOXP2O15409 715 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 WASHC4Q2M389 1173 aa15.41■□□□□ 0.06
SLC28A1-201ENST00000286749 BIN1O00499 593 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 SPTLC2O15270 562 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 PRC1O43663 620 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 SMC2O95347 1197 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 HSP90AB3PQ58FF7 597 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 FBXL16Q8N461 479 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 KCNG4Q8TDN1 519 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 XPO4Q9C0E2 1151 aaKnown RBP15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 DDX60Q8IY21 1712 aaKnown RBP15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 IGSF3O75054 1194 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 IMMTQ16891 758 aaKnown RBP15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 FBXO18Q8NFZ0 1043 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 OSBPL5Q9H0X9 879 aaPredicted RBP15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 POLR3EQ9NVU0 708 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 IFNKQ9P0W0 207 aa15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 ORC3Q9UBD5 711 aaPredicted RBP15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 DDX41Q9UJV9 622 aaKnown RBP15.4■□□□□ 0.06
SLC28A1-201ENST00000286749 YEATS4O95619 227 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 A1BGP04217 495 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 ADORA1P30542 326 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 MYSM1Q5VVJ2 828 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 TMC6Q7Z403 805 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 HPS5Q9UPZ3 1129 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 MYH7P12883 1935 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 KIF28PB7ZC32 967 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 CIAO1O76071 339 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 GORABQ5T7V8 394 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 KIF18AQ8NI77 898 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 CEP126Q9P2H0 1117 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 IMPACTQ9P2X3 320 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 TMEM94Q12767 1356 aa15.39■□□□□ 0.05
SLC28A1-201ENST00000286749 C4AP0C0L4 1744 aa15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 C4BP0C0L5 1744 aa15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 FGAP02671 866 aa15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 SLC3A2P08195 630 aaKnown RBP15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 TTC39AQ5SRH9 613 aa15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 MB21D2Q8IYB1 491 aaPredicted RBP15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 BPIFA3Q9BQP9 254 aa15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 KCND1Q9NSA2 647 aa15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 PARP4Q9UKK3 1724 aaKnown RBP15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 DHX16O60231 1041 aaKnown RBP15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 ZNF202O95125 648 aa15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 ANTXR2P58335 489 aa15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 ARMCX5Q6P1M9 558 aa15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 BRAPQ7Z569 592 aa15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.38■□□□□ 0.05
SLC28A1-201ENST00000286749 CPLX1O14810 134 aa15.37■□□□□ 0.05
SLC28A1-201ENST00000286749 KMT5BQ4FZB7 885 aa15.37■□□□□ 0.05
SLC28A1-201ENST00000286749 CCDC158Q5M9N0 1113 aa15.37■□□□□ 0.05
SLC28A1-201ENST00000286749 E4F1Q66K89 784 aaPredicted RBP15.37■□□□□ 0.05
SLC28A1-201ENST00000286749 SYNE3Q6ZMZ3 975 aa15.37■□□□□ 0.05
SLC28A1-201ENST00000286749 CCDC191Q8NCU4 936 aa15.37■□□□□ 0.05
SLC28A1-201ENST00000286749 ZNF397Q8NF99 534 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms