RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PPP2R5BQ15173 497 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 NME9Q86XW9 330 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC50Q8IVM0 306 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 IQUBQ8NA54 791 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 LINS1Q8NG48 757 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 CDCA7LQ96GN5 454 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 MIS12Q9H081 205 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 PAXBP1Q9Y5B6 917 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 ARHGEF11O15085 1522 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 IVLP07476 585 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 PSMC4P43686 418 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 ZBTB16Q05516 673 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC42Q96M95 316 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 LZTS2Q9BRK4 669 aa4.59□□□□□ -1.68
SCN3A-201ENST00000283254 UVSSAQ2YD98 709 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 SEL1L2Q5TEA6 688 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 FAM200AQ8TCP9 573 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 NSMCE1Q8WV22 266 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 WDR70Q9NW82 654 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 EMILIN1Q9Y6C2 1016 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 NOP56O00567 594 aaKnown RBP4.58□□□□□ -1.68
SCN3A-201ENST00000283254 NR1I2O75469 434 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 CRCPO75575 148 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 PLCD1P51178 756 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 EIF6P56537 245 aaKnown RBP4.58□□□□□ -1.68
SCN3A-201ENST00000283254 BIRC3Q13489 604 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 ELMSAN1Q6PJG2 1045 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 TMC6Q7Z403 805 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 CNGA4Q8IV77 575 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 TBC1D22AQ8WUA7 517 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 CCT6BQ92526 530 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 AZI2Q9H6S1 392 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 SLC4A4Q9Y6R1 1079 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 ZFYVE9O95405 1425 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 KLF18A0A0U1RQI7 1052 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 CCT6AP40227 531 aaKnown RBP4.58□□□□□ -1.68
SCN3A-201ENST00000283254 DNM2P50570 870 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 SNW1Q13573 536 aaKnown RBP4.58□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC114Q96M63 670 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 TRIM7Q9C029 511 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 NACA2Q9H009 215 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 PFDN4Q9NQP4 134 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 P4HA1P13674 534 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 KIF11P52732 1056 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 RARSP54136 660 aaKnown RBP4.58□□□□□ -1.68
SCN3A-201ENST00000283254 RNF187Q5TA31 235 aaPredicted RBP4.58□□□□□ -1.68
SCN3A-201ENST00000283254 DAAM2Q86T65 1068 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 PPFIBP2Q8ND30 876 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 KIFC2Q96AC6 838 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 NUP160Q12769 1436 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 MUM1L1Q5H9M0 696 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 CFAP58Q5T655 872 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC144CPQ8IYA2 1237 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 C10orf67Q8IYJ2 551 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 NEK11Q8NG66 645 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 C8orf37Q96NL8 207 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 NIP7Q9Y221 180 aaKnown RBP eCLIP4.58□□□□□ -1.68
SCN3A-201ENST00000283254 ATP5J2-PTCD1G3V325 749 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 PARP1P09874 1014 aaKnown RBP4.58□□□□□ -1.68
SCN3A-201ENST00000283254 VAV2P52735 878 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 GNG11P61952 73 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 MAK16Q9BXY0 300 aaKnown RBP4.58□□□□□ -1.68
SCN3A-201ENST00000283254 TSGA10Q9BZW7 698 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 VAT1LQ9HCJ6 419 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 PRXQ9BXM0 1461 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 KDM5BQ9UGL1 1544 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 PI4KAP2A4QPH2 592 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 A6NNZ2 444 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 TPD52P55327 224 aaPredicted RBP4.58□□□□□ -1.68
SCN3A-201ENST00000283254 TUBB8Q3ZCM7 444 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 MSL1Q68DK7 614 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 PI4KAP1Q8N8J0 262 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 FLAD1Q8NFF5 587 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 NKIRAS1Q9NYS0 192 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 TPCN1Q9ULQ1 816 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 ARHGEF10O15013 1369 aa4.58□□□□□ -1.68
SCN3A-201ENST00000283254 SH3TC1Q8TE82 1336 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 GRIN2AQ12879 1464 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 GOLGA8CPA6NN73 597 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 PFDN6O15212 129 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 KSR2Q6VAB6 950 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC63Q8NA47 563 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 TRIM6Q9C030 488 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 MCM9Q9NXL9 1143 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 DENND2AQ9ULE3 1009 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 RUSC2Q8N2Y8 1516 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 PABPC4Q13310 644 aaKnown RBP eCLIP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 TRPC3Q13507 836 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 SLC9C2Q5TAH2 1124 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 BRF1Q92994 677 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 IWS1Q96ST2 819 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 IBTKQ9P2D0 1353 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 RP1L1Q8IWN7 2480 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 ABCC5O15440 1437 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 HMGB3O15347 200 aaKnown RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 ACTN4O43707 911 aaKnown RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 RPUSD2Q8IZ73 545 aaKnown RBP4.57□□□□□ -1.68
SCN3A-201ENST00000283254 TEKT1Q969V4 418 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 PRIMPOLQ96LW4 560 aa4.57□□□□□ -1.68
SCN3A-201ENST00000283254 FNBP1Q96RU3 617 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms