RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 VPS36Q86VN1 386 aa16■□□□□ 0.15
CDH1-201ENST00000261769 PARP1P09874 1014 aaKnown RBP15.99■□□□□ 0.15
CDH1-201ENST00000261769 CFAP100Q494V2 611 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 KLHDC4Q8TBB5 520 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 RBM28Q9NW13 759 aaKnown RBP15.99■□□□□ 0.15
CDH1-201ENST00000261769 AOX1Q06278 1338 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 CETN2P41208 172 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 USP48Q86UV5 1035 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 TEKT1Q969V4 418 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 SYCP3Q8IZU3 236 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 SPATA5Q8NB90 893 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 KDRP35968 1356 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 ADCY10Q96PN6 1610 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 SKAP1Q86WV1 359 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 PLEKHM2Q8IWE5 1019 aa15.99■□□□□ 0.15
CDH1-201ENST00000261769 SAP30BPQ9UHR5 308 aaKnown RBP15.99■□□□□ 0.15
CDH1-201ENST00000261769 BIN2Q9UBW5 565 aaPredicted RBP15.98■□□□□ 0.15
CDH1-201ENST00000261769 IVNS1ABPQ9Y6Y0 642 aa15.98■□□□□ 0.15
CDH1-201ENST00000261769 CCDC102BQ68D86 513 aa15.98■□□□□ 0.15
CDH1-201ENST00000261769 TCEANC2Q96MN5 208 aa15.98■□□□□ 0.15
CDH1-201ENST00000261769 ZBTB1Q9Y2K1 713 aa15.98■□□□□ 0.15
CDH1-201ENST00000261769 JCADQ9P266 1359 aa15.98■□□□□ 0.15
CDH1-201ENST00000261769 GTF2IP78347 998 aa15.98■□□□□ 0.15
CDH1-201ENST00000261769 CREB3L3Q68CJ9 461 aa15.98■□□□□ 0.15
CDH1-201ENST00000261769 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.98■□□□□ 0.15
CDH1-201ENST00000261769 NAP1L4Q99733 375 aaKnown RBP15.98■□□□□ 0.15
CDH1-201ENST00000261769 PLA2R1Q13018 1463 aa15.98■□□□□ 0.15
CDH1-201ENST00000261769 ABCA9Q8IUA7 1624 aa15.98■□□□□ 0.15
CDH1-201ENST00000261769 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.97■□□□□ 0.15
CDH1-201ENST00000261769 MFSD14BQ5SR56 506 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 KBTBD3Q8NAB2 608 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 USP37Q86T82 979 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 TBC1D32Q96NH3 1257 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 TFIP11Q9UBB9 837 aaKnown RBP15.97■□□□□ 0.15
CDH1-201ENST00000261769 SERPINB2P05120 415 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 CHMLP26374 656 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 HSP90AA2PQ14568 343 aaPredicted RBP15.97■□□□□ 0.15
CDH1-201ENST00000261769 CCDC183Q5T5S1 534 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 CACNA2D4Q7Z3S7 1137 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 NEBLO76041 1014 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 FAM182BQ5T319 152 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 SPC24Q8NBT2 197 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 GLT8D2Q9H1C3 349 aa15.97■□□□□ 0.15
CDH1-201ENST00000261769 BRDTQ58F21 947 aaPredicted RBP15.96■□□□□ 0.15
CDH1-201ENST00000261769 TMX3Q96JJ7 454 aa15.96■□□□□ 0.15
CDH1-201ENST00000261769 TMEM87BQ96K49 555 aa15.96■□□□□ 0.15
CDH1-201ENST00000261769 CAMK4Q16566 473 aa15.96■□□□□ 0.15
CDH1-201ENST00000261769 EAPPQ56P03 285 aaPredicted RBP15.96■□□□□ 0.15
CDH1-201ENST00000261769 VSIG10Q8N0Z9 540 aa15.96■□□□□ 0.15
CDH1-201ENST00000261769 NECAB1Q8N987 351 aa15.96■□□□□ 0.15
CDH1-201ENST00000261769 ARMT1Q9H993 441 aa15.96■□□□□ 0.15
CDH1-201ENST00000261769 TTF2Q9UNY4 1162 aaKnown RBP15.96■□□□□ 0.15
CDH1-201ENST00000261769 BLMP54132 1417 aaPredicted RBP15.96■□□□□ 0.15
CDH1-201ENST00000261769 SPDYE4A6NLX3 237 aa15.96■□□□□ 0.15
CDH1-201ENST00000261769 ARID3AQ99856 593 aa15.96■□□□□ 0.15
CDH1-201ENST00000261769 TBC1D2Q9BYX2 928 aa15.96■□□□□ 0.15
CDH1-201ENST00000261769 TRIM75PA6NK02 468 aa15.96■□□□□ 0.14
CDH1-201ENST00000261769 BBOX1O75936 387 aa15.96■□□□□ 0.14
CDH1-201ENST00000261769 ERLIN2O94905 339 aa15.96■□□□□ 0.14
CDH1-201ENST00000261769 NCBP1Q09161 790 aaKnown RBP15.96■□□□□ 0.14
CDH1-201ENST00000261769 KCNG4Q8TDN1 519 aa15.96■□□□□ 0.14
CDH1-201ENST00000261769 EPB41L2O43491 1005 aaKnown RBP15.95■□□□□ 0.14
CDH1-201ENST00000261769 CC2D2BQ6DHV5 1058 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 ERCC4Q92889 916 aaPredicted RBP15.95■□□□□ 0.14
CDH1-201ENST00000261769 AATFQ9NY61 560 aaKnown RBP eCLIP15.95■□□□□ 0.14
CDH1-201ENST00000261769 GPAA1O43292 621 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 CCDC181Q5TID7 509 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 DCAF15Q66K64 600 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 RMND1Q9NWS8 449 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 CSADQ9Y600 493 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 BICD1Q96G01 975 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 RIMBP3CA6NJZ7 1639 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 RIMBP3BA6NNM3 1639 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 RIMBP3Q9UFD9 1639 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 FAM114A1Q8IWE2 563 aa15.95■□□□□ 0.14
CDH1-201ENST00000261769 ERVV-1B6SEH8 477 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 PPFIA3O75145 1194 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 CCDC40Q4G0X9 1142 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 CCDC174Q6PII3 467 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 FAM43AQ8N2R8 423 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 CDC42BPAQ5VT25 1732 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 IBTKQ9P2D0 1353 aaPredicted RBP15.94■□□□□ 0.14
CDH1-201ENST00000261769 HSP90B2PQ58FF3 399 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 TCERG1LQ5VWI1 586 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 KRT79Q5XKE5 535 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 FILIP1Q7Z7B0 1213 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 LEMD3Q9Y2U8 911 aa15.94■□□□□ 0.14
CDH1-201ENST00000261769 TNS3Q68CZ2 1445 aa15.93■□□□□ 0.14
CDH1-201ENST00000261769 UBE4AQ14139 1066 aa15.93■□□□□ 0.14
CDH1-201ENST00000261769 USP40Q9NVE5 1235 aa15.93■□□□□ 0.14
CDH1-201ENST00000261769 PALLDQ8WX93 1383 aa15.93■□□□□ 0.14
CDH1-201ENST00000261769 MTIF2P46199 727 aaKnown RBP15.93■□□□□ 0.14
CDH1-201ENST00000261769 DRC1Q96MC2 740 aa15.93■□□□□ 0.14
CDH1-201ENST00000261769 PANK2Q9BZ23 570 aa15.93■□□□□ 0.14
CDH1-201ENST00000261769 XDHP47989 1333 aa15.93■□□□□ 0.14
CDH1-201ENST00000261769 SULF1Q8IWU6 871 aa15.93■□□□□ 0.14
CDH1-201ENST00000261769 PIGBQ92521 554 aa15.93■□□□□ 0.14
CDH1-201ENST00000261769 SSR1P43307 286 aaKnown RBP15.92■□□□□ 0.14
CDH1-201ENST00000261769 EXOC1Q9NV70 894 aa15.92■□□□□ 0.14
CDH1-201ENST00000261769 ATP5JP18859 108 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms