RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 ALG1Q9BT22 464 aa16.27■□□□□ 0.2
ZC3H4-201ENST00000253048 SBNO2Q9Y2G9 1366 aa16.27■□□□□ 0.2
ZC3H4-201ENST00000253048 RBM25P49756 843 aaKnown RBP16.27■□□□□ 0.2
ZC3H4-201ENST00000253048 ASIC1P78348 528 aa16.27■□□□□ 0.2
ZC3H4-201ENST00000253048 FNBP1Q96RU3 617 aa16.27■□□□□ 0.2
ZC3H4-201ENST00000253048 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.2
ZC3H4-201ENST00000253048 WDR62O43379 1518 aa16.27■□□□□ 0.19
ZC3H4-201ENST00000253048 NPATQ14207 1427 aa16.27■□□□□ 0.19
ZC3H4-201ENST00000253048 ITGA6P23229 1130 aa16.27■□□□□ 0.19
ZC3H4-201ENST00000253048 ARID5AQ03989 594 aa16.27■□□□□ 0.19
ZC3H4-201ENST00000253048 NLGN1Q8N2Q7 840 aa16.27■□□□□ 0.19
ZC3H4-201ENST00000253048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.192e-7■■■■□ 24.1
ZC3H4-201ENST00000253048 ABCC10Q5T3U5 1492 aa16.27■□□□□ 0.19
ZC3H4-201ENST00000253048 PALM3A6NDB9 673 aaPredicted RBP16.27■□□□□ 0.19
ZC3H4-201ENST00000253048 CTAGE5O15320 804 aa16.27■□□□□ 0.19
ZC3H4-201ENST00000253048 MTHFSDQ2M296 383 aaKnown RBP16.27■□□□□ 0.19
ZC3H4-201ENST00000253048 HAUS7Q99871 368 aa16.27■□□□□ 0.19
ZC3H4-201ENST00000253048 DUOX2Q9NRD8 1548 aa16.26■□□□□ 0.19
ZC3H4-201ENST00000253048 ZSCAN12O43309 604 aa16.26■□□□□ 0.19
ZC3H4-201ENST00000253048 RNF113AO15541 343 aaKnown RBP16.26■□□□□ 0.19
ZC3H4-201ENST00000253048 CHMP2AO43633 222 aa16.26■□□□□ 0.19
ZC3H4-201ENST00000253048 RARSP54136 660 aaKnown RBP16.26■□□□□ 0.19
ZC3H4-201ENST00000253048 RRAGBQ5VZM2 374 aa16.26■□□□□ 0.19
ZC3H4-201ENST00000253048 GTF3C6Q969F1 213 aa16.26■□□□□ 0.19
ZC3H4-201ENST00000253048 DDX12PQ92771 950 aa16.26■□□□□ 0.19
ZC3H4-201ENST00000253048 CCDC169A6NNP5 214 aa16.26■□□□□ 0.19
ZC3H4-201ENST00000253048 ZEB2O60315 1214 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 DISP3Q9P2K9 1392 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 ABCC1P33527 1531 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 KRT2P35908 639 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 PUM3Q15397 648 aaKnown RBP16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 TBC1D22AQ8WUA7 517 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 CCDC66A2RUB6 948 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 PPFIA3O75145 1194 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 OSBPP22059 807 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 RBM28Q9NW13 759 aaKnown RBP16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 TRPC3Q13507 836 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 FAM89AQ96GI7 184 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 BIRC3Q13489 604 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 WDR44Q5JSH3 913 aa16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 PUS7Q96PZ0 661 aaKnown RBP16.25■□□□□ 0.19
ZC3H4-201ENST00000253048 CCDC102BQ68D86 513 aa16.24■□□□□ 0.19
ZC3H4-201ENST00000253048 LINS1Q8NG48 757 aa16.24■□□□□ 0.19
ZC3H4-201ENST00000253048 YEATS2Q9ULM3 1422 aa16.24■□□□□ 0.19
ZC3H4-201ENST00000253048 SFPQP23246 707 aaKnown RBP eCLIP16.24■□□□□ 0.19
ZC3H4-201ENST00000253048 ATP10AO60312 1499 aa16.24■□□□□ 0.19
ZC3H4-201ENST00000253048 MYCP01106 439 aaPredicted RBP16.24■□□□□ 0.19
ZC3H4-201ENST00000253048 NAA15Q9BXJ9 866 aaKnown RBP16.24■□□□□ 0.19
ZC3H4-201ENST00000253048 GJB2P29033 226 aa16.23■□□□□ 0.19
ZC3H4-201ENST00000253048 CASQ1P31415 396 aa16.23■□□□□ 0.19
ZC3H4-201ENST00000253048 ODF2LQ9ULJ1 636 aa16.23■□□□□ 0.19
ZC3H4-201ENST00000253048 CCNA1P78396 465 aa16.23■□□□□ 0.19
ZC3H4-201ENST00000253048 NCAPG2Q86XI2 1143 aa16.23■□□□□ 0.19
ZC3H4-201ENST00000253048 ZWINTO95229 277 aa16.23■□□□□ 0.19
ZC3H4-201ENST00000253048 LARP6Q9BRS8 491 aaKnown RBP16.23■□□□□ 0.19
ZC3H4-201ENST00000253048 FNBP4Q8N3X1 1017 aaPredicted RBP16.23■□□□□ 0.19
ZC3H4-201ENST00000253048 PLBD2Q8NHP8 589 aa16.23■□□□□ 0.19
ZC3H4-201ENST00000253048 TCP10L2B9ZVM9 353 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 AFMP43652 599 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 CFAP57Q96MR6 1250 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 MLXIPQ9HAP2 919 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 HAUS2Q9NVX0 235 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 STK25O00506 426 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 GABPAQ06546 454 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 TFCP2Q12800 502 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 MAK16Q9BXY0 300 aaKnown RBP16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 DPP9Q86TI2 863 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 TEKT1Q969V4 418 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 CCDC102AQ96A19 550 aa16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 DDX39AO00148 427 aaKnown RBP16.22■□□□□ 0.19
ZC3H4-201ENST00000253048 MBD4O95243 580 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 CFAP58Q5T655 872 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 BRF1Q92994 677 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 EXOC7Q9UPT5 735 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 RPRD2Q5VT52 1461 aaKnown RBP16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 SLC1A4P43007 532 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 KIAA0753Q2KHM9 967 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 KIF4BQ2VIQ3 1234 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 CCDC14Q49A88 953 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 GIMAP7Q8NHV1 300 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 USP40Q9NVE5 1235 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 LRFN2Q9ULH4 789 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 CD2APQ9Y5K6 639 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 GTF2IP78347 998 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 DALRD3Q5D0E6 543 aaKnown RBP16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 CCDC50Q8IVM0 306 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 CRACR2AQ9BSW2 395 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 RAD50Q92878 1312 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 RIOK3O14730 519 aaKnown RBP16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 NLRX1Q86UT6 975 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 GLG1Q92896 1179 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 KIFC2Q96AC6 838 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 BACH2Q9BYV9 841 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 NKTRP30414 1462 aaKnown RBP16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 IL16Q14005 1332 aa16.21■□□□□ 0.19
ZC3H4-201ENST00000253048 PRPHP41219 470 aa16.21■□□□□ 0.18
ZC3H4-201ENST00000253048 GSTA5Q7RTV2 222 aa16.21■□□□□ 0.18
ZC3H4-201ENST00000253048 ANO3Q9BYT9 981 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms