RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 ST5P78524 1137 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 NMIQ13287 307 aaPredicted RBP13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 ERCC6LQ2NKX8 1250 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 CARD6Q9BX69 1037 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 VWDEQ8N2E2 1590 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 SOS1Q07889 1333 aaPredicted RBP13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 PNMA6EA0A0J9YXQ4 647 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 GOLGA6L10A6NI86 522 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 SGSM2O43147 1006 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 TXLNAP40222 546 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 SYKP43405 635 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 KARSQ15046 597 aaKnown RBP13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 CCDC87Q9NVE4 849 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 NRBP1Q9UHY1 535 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 MARCKSP29966 332 aaPredicted RBP13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 EIF5P55010 431 aaKnown RBP13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 DDX46Q7L014 1031 aaKnown RBP13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 CDC37L1Q7L3B6 337 aa13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 CLSTN2Q9H4D0 955 aa13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 PHAXQ9H814 394 aaKnown RBP13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 GIMAP7Q8NHV1 300 aa13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 LEO1Q8WVC0 666 aaPredicted RBP13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 PUF60Q9UHX1 559 aaKnown RBP13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 A0A1B0GVL5 298 aa13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 IVLP07476 585 aa13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 CCDC102BQ68D86 513 aa13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 CTR9Q6PD62 1173 aa13.25□□□□□ -0.29
DNMT3B-201ENST00000201963 HSPA4P34932 840 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 ATP2B3Q16720 1220 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 RAD50Q92878 1312 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 CPS1P31327 1500 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 GOLIM4O00461 696 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 ODF2Q5BJF6 829 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 SIRT2Q8IXJ6 389 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 BCS1LQ9Y276 419 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 THRAP3Q9Y2W1 955 aaKnown RBP13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 POTEAQ6S8J7 498 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 TPTE2Q6XPS3 522 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 GOLGA1Q92805 767 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 NUP88Q99567 741 aaPredicted RBP13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 ABCC4O15439 1325 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
DNMT3B-201ENST00000201963 IFIT1P09914 478 aaKnown RBP13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 CWF19L2Q2TBE0 894 aaKnown RBP13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 RTL1A6NKG5 1358 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 PRAMEF22A3QJZ6 481 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 IQCEQ6IPM2 695 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 FAM89AQ96GI7 184 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.23□□□□□ -0.291e-6■■□□□ 13.8
DNMT3B-201ENST00000201963 LZTFL1Q9NQ48 299 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 ZBTB1Q9Y2K1 713 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 ERVV-2B6SEH9 535 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 TUBB4AP04350 444 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 TXNRD1Q16881 649 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 RNF187Q5TA31 235 aaPredicted RBP13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 TTC6Q86TZ1 520 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 CNBD1Q8NA66 436 aa13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 KDM5AP29375 1690 aaKnown RBP13.23□□□□□ -0.29
DNMT3B-201ENST00000201963 IDH1O75874 414 aaKnown RBP13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 MROH2AA6NES4 1674 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 IQGAP1P46940 1657 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 RHOXF2BP0C7M4 288 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 STIM1Q13586 685 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 METTL24Q5JXM2 366 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 PAXIP1Q6ZW49 1069 aaPredicted RBP13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 CCDC144CPQ8IYA2 1237 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 RHOXF2Q9BQY4 288 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 MTMR6Q9Y217 621 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 DEPDC5O75140 1603 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 IGSF1Q8N6C5 1336 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 CDC42BPGQ6DT37 1551 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 MICALL1Q8N3F8 863 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 NEK11Q8NG66 645 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 FAM107BQ9H098 131 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 SPTLC2O15270 562 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 DNA2P51530 1060 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 GRM1Q13255 1194 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 IFIT5Q13325 482 aaKnown RBP13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 SNRKQ9NRH2 765 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 ADAMTSL3P82987 1691 aa13.22□□□□□ -0.29
DNMT3B-201ENST00000201963 CTAGE15A4D2H0 777 aa13.21□□□□□ -0.29
DNMT3B-201ENST00000201963 CTAGE8P0CG41 777 aa13.21□□□□□ -0.29
DNMT3B-201ENST00000201963 PPP2R3AQ06190 1150 aa13.21□□□□□ -0.29
DNMT3B-201ENST00000201963 CTAGE6Q86UF2 777 aa13.21□□□□□ -0.29
DNMT3B-201ENST00000201963 CTAGE4Q8IX94 777 aa13.21□□□□□ -0.29
DNMT3B-201ENST00000201963 PLCD4Q9BRC7 762 aa13.21□□□□□ -0.29
DNMT3B-201ENST00000201963 TTC31Q49AM3 519 aaPredicted RBP13.21□□□□□ -0.29
DNMT3B-201ENST00000201963 ABCF2Q9UG63 623 aa13.21□□□□□ -0.29
DNMT3B-201ENST00000201963 TECPR2O15040 1411 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms