RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Ttc19Q8CC21 365 aa13.54□□□□□ -0.24
Trim11-202ENSMUST00000108809 Adam1bQ8R534 806 aa13.54□□□□□ -0.24
Trim11-202ENSMUST00000108809 Mei1Q9D4I2 1268 aa13.54□□□□□ -0.24
Trim11-202ENSMUST00000108809 Pes1Q9EQ61 584 aaKnown RBP13.54□□□□□ -0.24
Trim11-202ENSMUST00000108809 Kdm3aQ6PCM1 1323 aa13.54□□□□□ -0.24
Trim11-202ENSMUST00000108809 Trim30aP15533 496 aa13.53□□□□□ -0.24
Trim11-202ENSMUST00000108809 Appbp2Q9DAX9 585 aa13.53□□□□□ -0.24
Trim11-202ENSMUST00000108809 Cyp19a1P28649 503 aa13.53□□□□□ -0.24
Trim11-202ENSMUST00000108809 Ftl2P49945 183 aa13.53□□□□□ -0.24
Trim11-202ENSMUST00000108809 Edrf1Q6GQV7 1239 aa13.53□□□□□ -0.24
Trim11-202ENSMUST00000108809 U2af1l4Q8BGJ9 220 aa13.53□□□□□ -0.24
Trim11-202ENSMUST00000108809 SdsQ8VBT2 327 aa13.53□□□□□ -0.24
Trim11-202ENSMUST00000108809 Ankrd31A0A140LI88 1765 aa13.53□□□□□ -0.24
Trim11-202ENSMUST00000108809 Lmod3E9QA62 571 aa13.53□□□□□ -0.24
Trim11-202ENSMUST00000108809 Cnpy2Q9QXT0 182 aa13.53□□□□□ -0.24
Trim11-202ENSMUST00000108809 Plcb3P51432 1234 aaKnown RBP13.52□□□□□ -0.24
Trim11-202ENSMUST00000108809 Rapgef3Q8VCC8 918 aa13.52□□□□□ -0.24
Trim11-202ENSMUST00000108809 Kcnq5Q9JK45 933 aa13.52□□□□□ -0.24
Trim11-202ENSMUST00000108809 Ms4a1P19437 291 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Atp8a2P98200 1148 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Gpatch11Q3UFS4 262 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 ErmnQ5EBJ4 281 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Hps3Q91VB4 1002 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Yeats4Q9CR11 227 aaKnown RBP13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cfap99A0A140LIX9 648 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cyp2d9P11714 504 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cers3Q1A3B0 383 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cep63Q3UPP8 700 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Zkscan4Q5SZT6 480 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Itga6Q61739 1091 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cadps2Q8BYR5 1297 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cap2Q9CYT6 476 aa13.52□□□□□ -0.25
Trim11-202ENSMUST00000108809 Kcnd1Q03719 651 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Il17raQ60943 864 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Prkag3Q8BGM7 489 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Slu7Q8BHJ9 585 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 CrebrfQ8CDG5 640 aaKnown RBP13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Kcnq3Q8K3F6 873 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Zscan29E9Q5B4 869 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Gpr182P43142 395 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Zkscan8Q8BSL0 588 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Tmem87aQ8BXN9 555 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Alx1Q8C8B0 326 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 ImmtQ8CAQ8 757 aaKnown RBP13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cdc45Q9Z1X9 566 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Lrp6O88572 1613 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 CpdO89001 1377 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Ssc5dQ8BV57 1371 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Atp2b3Q0VF55 1220 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Igflr1Q3U4N7 345 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Tpcn2Q8BWC0 731 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Ccer1Q9CQL2 403 aa13.51□□□□□ -0.25
Trim11-202ENSMUST00000108809 Lama4P97927 1816 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Rgs12Q8CGE9 1381 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Ap5z1Q3U829 807 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Adam1aQ60813 791 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 TfrcQ62351 763 aaKnown RBP13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cep55Q8BT07 462 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Fam13bQ8K2H3 851 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Dnaaf4Q8R368 420 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Hnrnpul1Q8VDM6 859 aaKnown RBP13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Nop2Q922K7 793 aaKnown RBP13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Gm43638A0A0J9YU36 694 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Gm28047Q3US59 414 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Fam160b2Q80YR2 744 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Srek1Q8BZX4 494 aaKnown RBP13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Sox30Q8CGW4 782 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Anks1aP59672 1150 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Dnajc14Q921R4 703 aa13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Gigyf1Q99MR1 1044 aaKnown RBP13.5□□□□□ -0.25
Trim11-202ENSMUST00000108809 Ltbp4Q8K4G1 1666 aa13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 Card6E9PWH2 1175 aa13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 Gm20425E9Q035 978 aaKnown RBP13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 Hap1O35668 628 aa13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 SrprbP47758 269 aa13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 Sptlc2P97363 560 aaKnown RBP13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 Kiaa1524Q8BWY9 907 aa13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 Dync1i1O88485 628 aa13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 Emilin1Q99K41 1017 aa13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 Myh1Q5SX40 1942 aa13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 Akap11E9Q777 1895 aa13.49□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cyp3a59D3Z2W7 503 aa13.48□□□□□ -0.25
Trim11-202ENSMUST00000108809 Anxa1P10107 346 aaKnown RBP13.48□□□□□ -0.25
Trim11-202ENSMUST00000108809 Ube3bQ9ES34 1070 aa13.48□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cdhr2E9Q7P9 1308 aa13.48□□□□□ -0.25
Trim11-202ENSMUST00000108809 Pard3Q99NH2 1333 aa13.48□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cfap44E9Q5M6 1843 aa13.48□□□□□ -0.25
Trim11-202ENSMUST00000108809 Nfatc2ipO09130 412 aa13.48□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cnot6lQ8VEG6 555 aa13.48□□□□□ -0.25
Trim11-202ENSMUST00000108809 Stk38Q91VJ4 465 aa13.48□□□□□ -0.25
Trim11-202ENSMUST00000108809 Pcdhb22Q91XZ8 794 aa13.48□□□□□ -0.25
Trim11-202ENSMUST00000108809 Sec62Q8BU14 398 aaKnown RBP13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 GptQ8QZR5 496 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Acsbg1Q99PU5 721 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Sept12Q9D451 317 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Kndc1Q0KK55 1742 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Pcdhb9E9Q5G2 828 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Surf1P09925 306 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Cep135Q6P5D4 1140 aa13.47□□□□□ -0.25
Trim11-202ENSMUST00000108809 Fsd2Q8BZ52 692 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms