RNA–Protein interactions for RNA: ENST00000639002.1

CD44-239, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-239ENST00000639002 TMEM256Q8N2U0 113 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 ATPAF2Q8N5M1 289 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 LRRC52Q8N7C0 313 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 TTLQ8NG68 377 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 OR4K5Q8NGD3 323 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 OR5B17Q8NGF7 314 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 OR8K1Q8NGG5 319 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 OR5D18Q8NGL1 313 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 OR5L1Q8NGL2 311 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 OR13G1Q8NGZ3 307 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 ERMNQ8TAM6 284 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 NT5CQ8TCD5 201 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 C22orf15Q8WYQ4 148 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 PTX4Q96A99 478 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 TESCQ96BS2 214 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 ZMYND19Q96E35 227 aaPredicted RBP1.46□□□□□ -2.18
CD44-239ENST00000639002 TVP23CQ96ET8 276 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 BTN2A3PQ96KV6 586 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 CEP19Q96LK0 163 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 Q96MT0 163 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 SULT4A1Q9BR01 284 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 NXF2Q9GZY0 626 aaKnown RBP1.46□□□□□ -2.18
CD44-239ENST00000639002 TOLLIPQ9H0E2 274 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 ARL6Q9H0F7 186 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 METTL9Q9H1A3 318 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 PRORYQ9H606 182 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 MED4Q9NPJ6 270 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 DIABLOQ9NR28 239 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 RGS18Q9NS28 235 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 FKBP14Q9NWM8 211 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 FAM206AQ9NX38 181 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 CYB5R1Q9UHQ9 305 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 GUCA1BQ9UMX6 200 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 SLC22A13Q9Y226 551 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 ARL2BPQ9Y2Y0 163 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.46□□□□□ -2.18
CD44-239ENST00000639002 SAMHD1Q9Y3Z3 626 aaKnown RBP1.46□□□□□ -2.18
CD44-239ENST00000639002 TBL2Q9Y4P3 447 aaKnown RBP1.46□□□□□ -2.18
CD44-239ENST00000639002 KLF12Q9Y4X4 402 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 OR51B2Q9Y5P1 312 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 FHOD3Q2V2M9 1422 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 C9orf84Q5VXU9 1444 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 DENND4AQ7Z401 1863 aa1.46□□□□□ -2.18
CD44-239ENST00000639002 NUP153P49790 1475 aaKnown RBP1.45□□□□□ -2.18
CD44-239ENST00000639002 SLC5A10A0PJK1 596 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 OR2AT4A6NND4 320 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 NCBP2LA6PVI3 153 aaKnown RBP1.45□□□□□ -2.18
CD44-239ENST00000639002 EFCAB9A8MZ26 197 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 F5H5K5 113 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 KCNK1O00180 336 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 MPZL2O60487 215 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 SHOX2O60902 331 aaPredicted RBP1.45□□□□□ -2.18
CD44-239ENST00000639002 LYPLA2O95372 231 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 SOX14O95416 240 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 TNNC2P02585 160 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 ZNF806P0C7X5 589 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 PGA5P0DJD9 388 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 CD37P11049 281 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 GTF2H1P32780 548 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 RCVRNP35243 200 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 COILP38432 576 aaPredicted RBP1.45□□□□□ -2.18
CD44-239ENST00000639002 MAGEA12P43365 314 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 PPICP45877 212 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 GALR1P47211 349 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 CXCL12P48061 93 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 HSPA13P48723 471 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 TTPAP49638 278 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 AQP5P55064 265 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 RAB38P57729 211 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 RPS23P62266 143 aaKnown RBP1.45□□□□□ -2.18
CD44-239ENST00000639002 IL5RAQ01344 420 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 MGAT3Q09327 533 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 LAMTOR4Q0VGL1 99 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 TSPAN31Q12999 210 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 MLLT11Q13015 90 aaPredicted RBP1.45□□□□□ -2.18
CD44-239ENST00000639002 TOMM34Q15785 309 aaPredicted RBP1.45□□□□□ -2.18
CD44-239ENST00000639002 SLC25A35Q3KQZ1 300 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 CDNFQ49AH0 187 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 ACSM3Q53FZ2 586 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 YIF1BQ5BJH7 314 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 TIMM23BQ5SRD1 257 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 SAXO2Q658L1 398 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 MED27Q6P2C8 311 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 LRRN1Q6UXK5 716 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 FBXW12Q6X9E4 464 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 Q6ZT83 130 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 CCDC121Q6ZUS5 278 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 AKAP14Q86UN6 197 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 MDP1Q86V88 176 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 TMEM25Q86YD3 366 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 CBLN2Q8IUK8 224 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 HS3ST5Q8IZT8 346 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 DAW1Q8N136 415 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 ZFP82Q8N141 532 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 SPICQ8N5J4 248 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 TMEM156Q8N614 296 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 ZFP41Q8N8Y5 198 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 OR4K2Q8NGD2 314 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 OR2AE1Q8NHA4 323 aa1.45□□□□□ -2.18
CD44-239ENST00000639002 LINC01560Q8TB33 94 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms