RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 FBXW12Q6X9E4 464 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 CCDC36Q8IYA8 594 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 SLC38A6Q8IZM9 456 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 OR11L1Q8NGX0 322 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 MRPL24Q96A35 216 aaKnown RBP11.63□□□□□ -0.55
NEK3-205ENST00000610828 REG4Q9BYZ8 158 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 PLK3Q9H4B4 646 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 Q9N2K0 584 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 MED9Q9NWA0 146 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 RASL12Q9NYN1 266 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 MSGN1A6NI15 193 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 J3QW42 95 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 HS3ST1O14792 307 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 IL15RAQ13261 267 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 GGNBP1Q5YKI7 109 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 IQCF2Q8IXL9 164 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 FAM58AQ8N1B3 248 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 SUN5Q8TC36 379 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 GALNT14Q96FL9 552 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 TAAR6Q96RI8 345 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 SYT3Q9BQG1 590 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 OR51I2Q9H344 312 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 SCTP09683 121 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 LYL1P12980 280 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 FOXF2Q12947 444 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 TMEM187Q14656 261 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 INO80CQ6PI98 192 aaPredicted RBP11.62□□□□□ -0.55
NEK3-205ENST00000610828 ZADH2Q8N4Q0 377 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 SUMF2Q8NBJ7 301 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 OR1J1Q8NGS3 322 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 SLC25A40Q8TBP6 338 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 RDH5Q92781 318 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 PHYHIPLQ96FC7 376 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 RTL8AQ9BWD3 113 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 PKIBQ9C010 78 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 SPACA1Q9HBV2 294 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 CEACAM4O75871 244 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 AGFG2O95081 481 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 TK1P04183 234 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 UCP2P55851 309 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 UCP3P55916 312 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 SNTB1Q13884 538 aaKnown RBP11.62□□□□□ -0.55
NEK3-205ENST00000610828 ZNF169Q14929 603 aaPredicted RBP11.62□□□□□ -0.55
NEK3-205ENST00000610828 ZNF585AQ6P3V2 769 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 LINC00596Q86U02 117 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 WNT2BQ93097 391 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 SESN1Q9Y6P5 492 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 SVILO95425 2214 aa11.62□□□□□ -0.55
NEK3-205ENST00000610828 J3QT63 122 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 CNOT4O95628 575 aaKnown RBP11.61□□□□□ -0.55
NEK3-205ENST00000610828 ALKBH6Q3KRA9 238 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 ACSF3Q4G176 576 aaPredicted RBP11.61□□□□□ -0.55
NEK3-205ENST00000610828 Q6ZS49 121 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 ADAT1Q9BUB4 502 aaKnown RBP11.61□□□□□ -0.55
NEK3-205ENST00000610828 RSRP1Q9BUV0 290 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 SUCNR1Q9BXA5 334 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 DLL3Q9NYJ7 618 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 IGHV3-64DA0A0J9YX35 117 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 PHF1O43189 567 aaPredicted RBP11.61□□□□□ -0.55
NEK3-205ENST00000610828 DIRAS3O95661 229 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 SRSF7Q16629 238 aaKnown RBP eCLIP11.61□□□□□ -0.55
NEK3-205ENST00000610828 PAN3Q58A45 887 aaKnown RBP11.61□□□□□ -0.55
NEK3-205ENST00000610828 LYZL2Q7Z4W2 148 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 CCDC71LQ8N9Z2 235 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 SECTM1Q8WVN6 248 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 AQP10Q96PS8 301 aa11.61□□□□□ -0.55
NEK3-205ENST00000610828 MGAQ8IWI9 3026 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 TRAV24A0A0B4J272 114 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 KIR2DS1A0A191URI9 304 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 A0A1B0GW55 424 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 SLC34A2O95436 690 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 SCGB1D2O95969 90 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 DUX4L2P0CJ85 424 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 DUX4L3P0CJ86 424 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 DUX4L4P0CJ87 422 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 DUX4L5P0CJ88 424 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 DUX4L6P0CJ89 424 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 DUX4L7P0CJ90 424 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 TPT1P13693 172 aaKnown RBP11.6□□□□□ -0.55
NEK3-205ENST00000610828 ZNF44P15621 663 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 COX5AP20674 150 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 KIR2DS4P43632 304 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 IL13RA2Q14627 380 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 KIR2DS1Q14954 304 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 HERPUD1Q15011 391 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 SPIN3Q5JUX0 258 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 OR2A2Q6IF42 318 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 C20orf204Q6ZNR8 217 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 LIAT1Q6ZQX7 453 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 WDR86Q86TI4 376 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 SCCPDHQ8NBX0 429 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 GLYATL2Q8WU03 294 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 CNTNAP3BQ96NU0 1288 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 CNTNAP3Q9BZ76 1288 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 COQ3Q9NZJ6 369 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 DUX4Q9UBX2 424 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 ATP23Q9Y6H3 246 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 TRDCB7Z8K6 153 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 RAC2P15153 192 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms