RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 FKBP6O75344 327 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 DUS4LO95620 317 aaKnown RBP6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 RPLP1P05386 114 aaKnown RBP6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 KRT8P05787 483 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 ANXA8P13928 327 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 ZNF44P15621 663 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 POLR2IP36954 125 aaKnown RBP6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 REG1BP48304 166 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 GNG10P50151 68 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 MTCP1P56278 107 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 C17orf58Q2M2W7 97 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 HEPN1Q6WQI6 88 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 C5orf56Q8N8D9 126 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 OR10H4Q8NGA5 316 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 RFESDQ8TAC1 157 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 UBALD1Q8TB05 177 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 ZNF596Q8TC21 504 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 TOMM40LQ969M1 308 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 FGGYQ96C11 551 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 GAL3ST2Q9H3Q3 398 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 HMG20AQ9NP66 347 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 EXOSC4Q9NPD3 245 aaKnown RBP6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 ZNF581Q9P0T4 197 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 MOB4Q9Y3A3 225 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 HSPE1-MOB4S4R3N1 261 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 ODAMA1E959 279 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 METTL15A6NJ78 407 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 DHRS7CA6NNS2 312 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 GATBO75879 557 aaKnown RBP6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 SNRPBP14678 240 aaKnown RBP6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 TMEM11P17152 192 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 CD34P28906 385 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 ERP29P30040 261 aaKnown RBP6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 ECI1P42126 302 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 PTGFRP43088 359 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 GLP1RP43220 463 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 RBP2P50120 134 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 ATP1B3P54709 279 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 DGCR2P98153 550 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 EFNB1P98172 346 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 PDZK1IP1Q13113 114 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 ZNF146Q15072 292 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 KRBOX4Q5JUW0 171 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 Q6P435 159 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 FAHD1Q6P587 224 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 ZBTB49Q6ZSB9 765 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 OR51D1Q8NGF3 324 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 OR51A4Q8NGJ6 313 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 OR13A1Q8NGR1 328 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 OR13C9Q8NGT0 318 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 MUC7Q8TAX7 377 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 TMEM163Q8TC26 289 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 RPEQ96AT9 228 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 KIRREL1Q96J84 757 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 NR1H4Q96RI1 486 aaPredicted RBP6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 ADI1Q9BV57 179 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 TEX12Q9BXU0 123 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 NEK6Q9HC98 313 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 H2AFY2Q9P0M6 372 aaPredicted RBP6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 GNG8Q9UK08 70 aa6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 LSM4Q9Y4Z0 139 aaKnown RBP6.8□□□□□ -1.32
SHKBP1-220ENST00000599716 A0A1W2PPI3 338 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 AQP12BA6NM10 295 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 ZAR1LA6NP61 321 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 H3BUI4 141 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 CCL24O00175 119 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 SLC33A1O00400 549 aaPredicted RBP6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 SH2D1BO14796 132 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 SERPINA3P01011 423 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 IGKV1D-33P01593 117 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 IGKV1-33P01594 117 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 FAM106CPP0CH98 169 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 ATF1P18846 271 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 LMO1P25800 156 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 CEACAM3P40198 252 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 MYCNOSP40205 109 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 MNDAP41218 407 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 MNAT1P51948 309 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 NANOS3P60323 173 aaKnown RBP6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 ACTR3P61158 418 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 ZNF85Q03923 595 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 BNIP1Q12981 228 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 GK3PQ14409 553 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 CDK5R1Q15078 307 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 NXNL2Q5VZ03 156 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 LPCAT4Q643R3 524 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 C12orf73Q69YU5 71 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 OR52W1Q6IF63 320 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 SLC35E3Q7Z769 313 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 RTN4RL2Q86UN3 420 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 ZNF695Q8IW36 515 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 AQP12AQ8IXF9 295 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 ENTHD1Q8IYW4 607 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 ARHGAP24Q8N264 748 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 OR4D6Q8NGJ1 314 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 CORO2AQ92828 525 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 OPALINQ96PE5 141 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 KRT84Q9NSB2 600 aa6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.79□□□□□ -1.32
SHKBP1-220ENST00000599716 KIF25Q9UIL4 384 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms