RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ST8SIA3O43173 380 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 IGKV1D-12P01611 117 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 NKX2-1P43699 371 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-217ENST00000584582 TMEM33P57088 247 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 PTX4Q96A99 478 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 GPR87Q9BY21 358 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 ALX4Q9H161 411 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-217ENST00000584582 RPS10P5Q9NQ39 176 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 KCNIP1Q9NZI2 227 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 IGLV3-32A0A0A0MS00 114 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 RPS10-NUDT3A0A1W2PQS6 291 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 KRBOX1C9JBD0 128 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 OR13C7P0DN81 318 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 MPPED2Q15777 294 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 SPINK9Q5DT21 86 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 SIGIRRQ6IA17 410 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 OR8G2PQ6IF36 304 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 OR10V1Q8NGI7 309 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 ZNF71Q9NQZ8 489 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-217ENST00000584582 SMCO3A2RU48 225 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 LINC00862A6NCI5 91 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 H7C2Y5 167 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 LDLRAD4O15165 306 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 ARR3P36575 388 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 ZNF83P51522 516 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 RSPO1Q2MKA7 263 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-217ENST00000584582 RTL6Q6ICC9 239 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 GAPTQ8N292 157 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 RGCCQ9H4X1 137 aa9.76□□□□□ -0.85
TOP3A-217ENST00000584582 INTS1Q8N201 2190 aaKnown RBP9.75□□□□□ -0.85
TOP3A-217ENST00000584582 G3V3Q6 166 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 RHBDL1O75783 438 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 FTH1P19P0C7X4 201 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 NHLRC3Q5JS37 347 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 HS3ST6Q96QI5 342 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 PRRX2Q99811 253 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 RCL1Q9Y2P8 373 aaKnown RBP9.75□□□□□ -0.85
TOP3A-217ENST00000584582 PUS1Q9Y606 427 aaKnown RBP eCLIP9.75□□□□□ -0.85
TOP3A-217ENST00000584582 ADAM20O43506 726 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 LILRA1O75019 489 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 NHLH2Q02577 135 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 OVCH2Q7RTZ1 564 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 MARS2Q96GW9 593 aaKnown RBP9.75□□□□□ -0.85
TOP3A-217ENST00000584582 Q96M66 194 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 IER2Q9BTL4 223 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 KIF25Q9UIL4 384 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 LOC390937A0A1W2PQ73 354 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 KRASP01116 189 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 PPYP01298 95 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 S100A6P06703 90 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 CBR1P16152 277 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 GNG3P63215 75 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 CLPPQ16740 277 aaPredicted RBP9.75□□□□□ -0.85
TOP3A-217ENST00000584582 NSUN5P2Q63ZY6 315 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 TMEM65Q6PI78 240 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 FIP1L1Q6UN15 594 aaKnown RBP9.75□□□□□ -0.85
TOP3A-217ENST00000584582 FAM58AQ8N1B3 248 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 LILRB2Q8N423 598 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 C2CD4CQ8TF44 421 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 RAB18Q9NP72 206 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 GNG12Q9UBI6 72 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 NBEAQ8NFP9 2946 aa9.75□□□□□ -0.85
TOP3A-217ENST00000584582 C21orf140B9A014 251 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 CDX4O14627 284 aaPredicted RBP9.74□□□□□ -0.85
TOP3A-217ENST00000584582 CYTIPO60759 359 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 BMP5P22003 454 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 ZNF573Q86YE8 665 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 TMEM230Q96A57 120 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 ZC3H10Q96K80 434 aaKnown RBP9.74□□□□□ -0.85
TOP3A-217ENST00000584582 RTBDNQ9BSG5 229 aaPredicted RBP9.74□□□□□ -0.85
TOP3A-217ENST00000584582 FN3KRPQ9HA64 309 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 FOXD3Q9UJU5 478 aaPredicted RBP9.74□□□□□ -0.85
TOP3A-217ENST00000584582 NPTNQ9Y639 398 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 H0YIZ8 118 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 M0R1B8 84 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 HMGB3O15347 200 aaKnown RBP9.74□□□□□ -0.85
TOP3A-217ENST00000584582 FHITP49789 147 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 RBM11P57052 281 aaKnown RBP9.74□□□□□ -0.85
TOP3A-217ENST00000584582 B3GALT5-AS1P59052 145 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 ZNF816Q0VGE8 651 aaPredicted RBP9.74□□□□□ -0.85
TOP3A-217ENST00000584582 SLC25A40Q8TBP6 338 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 NAA60Q9H7X0 242 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 RNF222A6NCQ9 220 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 NKX2-6A6NCS4 301 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 SOX15O60248 233 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 RAC2P15153 192 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 SPANXN5Q5MJ07 72 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 PRAMEF6Q5VXH4 476 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 TBC1D26Q86UD7 250 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 SLC35G3Q8N808 338 aa9.74□□□□□ -0.85
TOP3A-217ENST00000584582 TRAF4Q9BUZ4 470 aaPredicted RBP9.74□□□□□ -0.85
TOP3A-217ENST00000584582 CDRT15L2A8MXV6 281 aa9.73□□□□□ -0.85
TOP3A-217ENST00000584582 LHX2P50458 406 aa9.73□□□□□ -0.85
TOP3A-217ENST00000584582 PPP1CBP62140 327 aa9.73□□□□□ -0.85
TOP3A-217ENST00000584582 FOXO1Q12778 655 aa9.73□□□□□ -0.85
TOP3A-217ENST00000584582 EIF3IQ13347 325 aaKnown RBP9.73□□□□□ -0.85
TOP3A-217ENST00000584582 HAGHQ16775 308 aa9.73□□□□□ -0.85
TOP3A-217ENST00000584582 VAX1Q5SQQ9 334 aa9.73□□□□□ -0.85
TOP3A-217ENST00000584582 FBXW9Q5XUX1 488 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms