RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NPBWR2P48146 333 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 TMBIM6P55061 237 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 LCN2P80188 198 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 SCGB2A2Q13296 93 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 IL13RA2Q14627 380 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 DGUOKQ16854 277 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 LRRC10Q5BKY1 277 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 WDR25Q64LD2 544 aaPredicted RBP8.2□□□□□ -1.1
GGA3-209ENST00000580646 LINC00596Q86U02 117 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 TPRA1Q86W33 373 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 OR5D18Q8NGL1 313 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 OR6M1Q8NGM8 313 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 DACT3Q96B18 629 aaPredicted RBP8.2□□□□□ -1.1
GGA3-209ENST00000580646 SEH1LQ96EE3 360 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 S100A13Q99584 98 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 METTL9Q9H1A3 318 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 CNTD2Q9H8S5 307 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 RBFOX1Q9NWB1 397 aaKnown RBP8.2□□□□□ -1.1
GGA3-209ENST00000580646 TXNL4BQ9NX01 149 aaKnown RBP8.2□□□□□ -1.1
GGA3-209ENST00000580646 SSR3Q9UNL2 185 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 A0A0A6YYJ9 748 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 DVL1O14640 695 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 WIPF1O43516 503 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 NDUFB3O43676 98 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 TMEM127O75204 238 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 LIPFP07098 398 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 CAPZA1P52907 286 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 GMFBP60983 142 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 SEC61A1P61619 476 aaKnown RBP8.19□□□□□ -1.1
GGA3-209ENST00000580646 PAX2Q02962 417 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 RSU1Q15404 277 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 AWAT2Q6E213 333 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 C1QL2Q7Z5L3 287 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 SLC38A6Q8IZM9 456 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 JAGN1Q8N5M9 183 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 CD177Q8N6Q3 437 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 CHST4Q8NCG5 386 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 OR5T2Q8NGG2 359 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 OR13F1Q8NGS4 319 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 C8orf46Q8TAG6 207 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 YIPF6Q96EC8 236 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 C1orf147Q96MC9 270 aaPredicted RBP8.19□□□□□ -1.1
GGA3-209ENST00000580646 CCL13Q99616 98 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 BCL7BQ9BQE9 202 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 C7orf69Q9H7B7 122 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 IFT22Q9H7X7 185 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 SCPEP1Q9HB40 452 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 OR5V1Q9UGF6 321 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 MRPS28Q9Y2Q9 187 aaKnown RBP8.19□□□□□ -1.1
GGA3-209ENST00000580646 RBMX2Q9Y388 322 aaKnown RBP8.19□□□□□ -1.1
GGA3-209ENST00000580646 MAB21L2Q9Y586 359 aa8.19□□□□□ -1.1
GGA3-209ENST00000580646 TRBV23-1A0A0A0MS06 115 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A10PA6NDY2 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A18PA6NE21 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A16PA6NEW6 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A20PA6NIJ5 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A8PA6NJQ4 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A7PA6NKC0 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A22PA8MWA6 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A12PA8MX19 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A5PA8MXJ8 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A23PA8MXZ1 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 H3BMQ9 156 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 H3BUI4 141 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 K7N7A8 449 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 SLC17A2O00624 439 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 SH2D1BO14796 132 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 ZNF737O75373 536 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FCN3O75636 299 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 VENTXO95231 258 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 HAND1O96004 215 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 CSTBP04080 98 aaKnown RBP8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A15PP0C7V4 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A13PP0C7W8 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A14PP0C7W9 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM90A24PP0C7X0 464 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 PPIAL4GP0DN37 164 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 GTF2F2P13984 249 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 RAB3BP20337 219 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 EPHA1P21709 976 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 GADD45AP24522 165 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 HTR2CP28335 458 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 RCVRNP35243 200 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 GABRA2P47869 451 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 SERPINB10P48595 397 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 IFITM2Q01629 132 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 MPV17LQ2QL34 196 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 C22orf42Q6IC83 251 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 GLIPR1L1Q6UWM5 242 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 OSR2Q8N2R0 312 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 FAM216BQ8N7L0 139 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 LY6G5BQ8NDX9 201 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 OR4D6Q8NGJ1 314 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 OR5D13Q8NGL4 314 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 PPP1R35Q8TAP8 253 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 NANPQ8TBE9 248 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 ZNF418Q8TF45 676 aaPredicted RBP8.18□□□□□ -1.1
GGA3-209ENST00000580646 RAB2BQ8WUD1 216 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 RAB40AQ8WXH6 277 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 SNX22Q96L94 193 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms