RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 IL36GQ9NZH8 169 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 ING4Q9UNL4 249 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 LRRC42Q9Y546 428 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 IGHV3OR16-10A0A075B7F0 116 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 MAGEA13PA6NCF6 341 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 FAM181BA6NEQ2 426 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 M0QZ24 198 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 PSPNO60542 156 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 OR2H2O95918 312 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 MAS1P04201 325 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 OR3A4PP47883 348 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 SNU13P55769 128 aaKnown RBP12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 RAG2P55895 527 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 EMX1Q04741 257 aaPredicted RBP12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 RSU1Q15404 277 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 OLFML2AQ68BL7 652 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 TMEM200BQ69YZ2 307 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 Q6P435 159 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 GDPD3Q7L5L3 318 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 CHST4Q8NCG5 386 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 OR4M1Q8NGD0 313 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 OR4F5Q8NH21 305 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 LHX4Q969G2 390 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 S100A13Q99584 98 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 FAM192AQ9GZU8 254 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 PCDHB16Q9NRJ7 776 aa12.86□□□□□ -0.35
CHMP1A-206ENST00000549139 IGHV1-69DA0A0B4J2H0 117 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 MGST3O14880 152 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 HOXA3O43365 443 aaPredicted RBP12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 ZNF780AO75290 641 aaPredicted RBP12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 CDRT1O95170 752 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 NDUFA7O95182 113 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 HTR3BO95264 441 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 IGHV1-69P01742 117 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 GABRR1P24046 479 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 PSMA1P25786 263 aaKnown RBP12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 ERP29P30040 261 aaKnown RBP12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 GP2P55259 537 aaKnown RBP12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 IL13RA2Q14627 380 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 INSL4Q14641 139 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 GRK1Q15835 563 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 BRICD5Q6PL45 260 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 ZNF367Q7RTV3 350 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 CEACAM19Q7Z692 300 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 LYPD6Q86Y78 171 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 C1QL4Q86Z23 238 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 SVOPQ8N4V2 548 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 NKAIN3Q8N8D7 197 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 OR4S1Q8NGB4 309 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 PHYHIPQ92561 330 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 NKX3-1Q99801 234 aaPredicted RBP12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 METTL8Q9H825 291 aaKnown RBP12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 TCF7L1Q9HCS4 588 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 C1RLQ9NZP8 487 aa12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 SF3B6Q9Y3B4 125 aaKnown RBP12.85□□□□□ -0.35
CHMP1A-206ENST00000549139 CLPSL1A2RUU4 121 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 SIRPB1O00241 398 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 TIMM23O14925 209 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 DEGS1O15121 323 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 CSTBP04080 98 aaKnown RBP12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 UCHL1P09936 223 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 ZNF44P15621 663 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 SRMP19623 302 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 EDDM3BP56851 147 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 GUCA2AQ02747 115 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 SCN1BQ07699 218 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 GPR176Q14439 515 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 NHLRC3Q5JS37 347 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 BRD3OSQ6XYD6 125 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 TMEM91Q6ZNR0 172 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 JAGN1Q8N5M9 183 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 C11orf42Q8N5U0 333 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 OR10K1Q8NGX5 313 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 TNFRSF14Q92956 283 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 TMEM203Q969S6 136 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 FOXRED1Q96CU9 486 aaPredicted RBP12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 UQCC2Q9BRT2 126 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 CHST6Q9GZX3 395 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 SIRT7Q9NRC8 400 aa12.84□□□□□ -0.35
CHMP1A-206ENST00000549139 hCG_1809904A0A1W2PP81 198 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 A0A1W2PPE2 198 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 A0A1W2PR64 198 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 A0A1W2PRV1 198 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 FUOMA2VDF0 154 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 SLC33A1O00400 549 aaPredicted RBP12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 CSN2P05814 226 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 CD37P11049 281 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 OR3A1P47881 315 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 RPS25P62851 125 aaKnown RBP12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 ZNF273Q14593 569 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 DEFB112Q30KQ8 113 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 HSD17B12Q53GQ0 312 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 FAM27D1Q5T7N8 215 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 NCR3LG1Q68D85 454 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 SPARTQ8N0X7 666 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 OSR2Q8N2R0 312 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 MUL1Q969V5 352 aa12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 NR1H4Q96RI1 486 aaPredicted RBP12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 PPIL3Q9H2H8 161 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms