RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 GGHQ92820 318 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 RANBP3Q9H6Z4 567 aaPredicted RBP13.78□□□□□ -0.2
SQLE-205ENST00000521232 TAS2R3Q9NYW6 316 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 CLEC2DQ9UHP7 191 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 MINOS1-NBL1R4GNA1 71 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 TRGV10A0A0A0MS01 117 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 M0QZ24 198 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 GABRPO00591 440 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 MMP23AO75900 390 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 LALBAP00709 142 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 GABRA5P31644 462 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 GLIPR1P48060 266 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 RAB13P51153 203 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 DYNLT3P51808 116 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 FAM189A2Q15884 450 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 OGFRL1Q5TC84 451 aaPredicted RBP13.77□□□□□ -0.21
SQLE-205ENST00000521232 HEPN1Q6WQI6 88 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 TRAPPC6BQ86SZ2 158 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 SATL1Q86VE3 508 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 DTX3Q8N9I9 347 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 ZNF485Q8NCK3 441 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 OR51T1Q8NGJ9 327 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 OR52N1Q8NH53 320 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 TMEM106AQ96A25 262 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 SMIM19Q96E16 107 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 COQ2Q96H96 371 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 CLEC7AQ9BXN2 247 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 GAL3ST2Q9H3Q3 398 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 TCF7L1Q9HCS4 588 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 TAS2R4Q9NYW5 299 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 ZNF281Q9Y2X9 895 aa13.77□□□□□ -0.21
SQLE-205ENST00000521232 ODAMA1E959 279 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 CASQ2O14958 399 aaPredicted RBP13.76□□□□□ -0.21
SQLE-205ENST00000521232 CHST1O43916 411 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 CAPGP40121 348 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 EFNB2P52799 333 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 ST3GAL4Q11206 333 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 MED21Q13503 144 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 KRBOX4Q5JUW0 171 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 DMKNQ6E0U4 476 aaPredicted RBP13.76□□□□□ -0.21
SQLE-205ENST00000521232 OR52W1Q6IF63 320 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 C11orf88Q6PI97 169 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 CCBE1Q6UXH8 406 aaPredicted RBP13.76□□□□□ -0.21
SQLE-205ENST00000521232 OR4C13Q8NGP0 309 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 TNFAIP8L1Q8WVP5 186 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 GHSRQ92847 366 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 GPER1Q99527 375 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 CHCHD3Q9NX63 227 aaKnown RBP13.76□□□□□ -0.21
SQLE-205ENST00000521232 TCF19Q9Y242 345 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 NOTCH1P46531 2555 aa13.76□□□□□ -0.21
SQLE-205ENST00000521232 A6NDX4 124 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 H0YJX3 145 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 CDK2P24941 298 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 PTGFRP43088 359 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 IL13RA2Q14627 380 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 PLA1AQ53H76 456 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 LAIR2Q6ISS4 152 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 RTN4RL2Q86UN3 420 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 ABHD12Q8N2K0 398 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 FBLIM1Q8WUP2 373 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 NR1H4Q96RI1 486 aaPredicted RBP13.75□□□□□ -0.21
SQLE-205ENST00000521232 NPFFR1Q9GZQ6 430 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 NCOR1P1Q9H4R4 102 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 TMEM138Q9NPI0 162 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 ABCB10Q9NRK6 738 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 PLCXD1Q9NUJ7 323 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 CNOT2Q9NZN8 540 aaKnown RBP13.75□□□□□ -0.21
SQLE-205ENST00000521232 PITPNC1Q9UKF7 332 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 SIGLEC9Q9Y336 463 aa13.75□□□□□ -0.21
SQLE-205ENST00000521232 TRAV24A0A0B4J272 114 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 TRBV5-5A0A0J9YX44 114 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 EFCAB10A6NFE3 127 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 GPX5O75715 221 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 GNAO1P09471 354 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 IGFBP3P17936 291 aaPredicted RBP13.74□□□□□ -0.21
SQLE-205ENST00000521232 HTR1DP28221 377 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 RPS11P62280 158 aaKnown RBP eCLIP13.74□□□□□ -0.21
SQLE-205ENST00000521232 BDH1Q02338 343 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 RSU1Q15404 277 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 PRAMEF5Q5TYX0 476 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 BAIAP2L2Q6UXY1 529 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 C8orf59Q8N0T1 100 aaPredicted RBP13.74□□□□□ -0.21
SQLE-205ENST00000521232 OR4P4Q8NGL7 312 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 OR2T6Q8NHC8 308 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 OR6C3Q9NZP0 311 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 PSORS1C1Q9UIG5 152 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 HILPDAQ9Y5L2 63 aa13.74□□□□□ -0.21
SQLE-205ENST00000521232 A0A087X0M5 115 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 A0A1B0GX30 115 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 ZNF729A6NN14 1252 aaPredicted RBP13.73□□□□□ -0.21
SQLE-205ENST00000521232 FAM90A22PA8MWA6 464 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 IGLV1-47P01700 117 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 CGB3P0DN86 165 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 CGB7P0DN87 165 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 CD34P28906 385 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 BDKRB2P30411 391 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 ZNF93P35789 620 aaPredicted RBP13.73□□□□□ -0.21
SQLE-205ENST00000521232 GDNFP39905 211 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 OR3A4PP47883 348 aa13.73□□□□□ -0.21
SQLE-205ENST00000521232 PPP3R1P63098 170 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms