RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 NUDCD2Q8WVJ2 157 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 EMG1Q92979 244 aaKnown RBP7.19□□□□□ -1.26
VAPB-206ENST00000520497 ERGIC1Q969X5 290 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 ZNF488Q96MN9 340 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 SCGB3A2Q96PL1 93 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 CMSS1Q9BQ75 279 aaKnown RBP7.19□□□□□ -1.26
VAPB-206ENST00000520497 OCSTAMPQ9BR26 566 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 GINS4Q9BRT9 223 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 C20orf85Q9H1P6 137 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 ZMAT3Q9HA38 289 aaKnown RBP7.19□□□□□ -1.26
VAPB-206ENST00000520497 UFSP2Q9NUQ7 469 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 ZNF701Q9NV72 531 aaPredicted RBP7.19□□□□□ -1.26
VAPB-206ENST00000520497 IL36RNQ9UBH0 155 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 CELSR2Q9HCU4 2923 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 UBE2QL1A1L167 161 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 A6NLC8 198 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 MCRIP1C9JLW8 97 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.18□□□□□ -1.26
VAPB-206ENST00000520497 H7C1Q1 480 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 GEMIN2O14893 280 aaKnown RBP7.18□□□□□ -1.26
VAPB-206ENST00000520497 SSX4O60224 188 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 OR7C1O76099 320 aaPredicted RBP7.18□□□□□ -1.26
VAPB-206ENST00000520497 NDUFB6O95139 128 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 NXPH2O95156 264 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 LHBP01229 141 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 CD8AP01732 235 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 CD74P04233 296 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 CD3DP04234 171 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 PTHLHP12272 177 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 PRKACAP17612 351 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 DTYMKP23919 212 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 CHATP28329 748 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 MDH2P40926 338 aaKnown RBP7.18□□□□□ -1.26
VAPB-206ENST00000520497 ECI1P42126 302 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 ARPC4P59998 168 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 IKZF1Q13422 519 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 ZNF146Q15072 292 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 TESK1Q15569 626 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 TAF9Q16594 264 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 TATDN3Q17R31 274 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 CHRFAM7AQ494W8 412 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 ATAD3CQ5T2N8 411 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 METTL11BQ5VVY1 283 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 SFRP4Q6FHJ7 346 aaPredicted RBP7.18□□□□□ -1.26
VAPB-206ENST00000520497 ACP7Q6ZNF0 438 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 RTN4RL2Q86UN3 420 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 CADM3Q8N126 398 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 BATF2Q8N1L9 274 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 ZCCHC24Q8N2G6 241 aaKnown RBP7.18□□□□□ -1.26
VAPB-206ENST00000520497 BPIFB2Q8N4F0 458 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 ARRDC1Q8N5I2 433 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 GCSAMQ8N6F7 178 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 OR4K15Q8NH41 348 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 ST8SIA4Q92187 359 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 UPRTQ96BW1 309 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 MS4A5Q9H3V2 200 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 RIMS4Q9H426 269 aaPredicted RBP7.18□□□□□ -1.26
VAPB-206ENST00000520497 IFT22Q9H7X7 185 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 FN3KRPQ9HA64 309 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 CHMP1AQ9HD42 196 aaPredicted RBP7.18□□□□□ -1.26
VAPB-206ENST00000520497 GCM1Q9NP62 436 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 DYNLRB1Q9NP97 96 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 C12orf4Q9NQ89 552 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 CBLN4Q9NTU7 201 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 C1orf123Q9NWV4 160 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 ZNF581Q9P0T4 197 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 RCC2Q9P258 522 aaKnown RBP7.18□□□□□ -1.26
VAPB-206ENST00000520497 FBXO9Q9UK97 447 aaPredicted RBP7.18□□□□□ -1.26
VAPB-206ENST00000520497 KCNK7Q9Y2U2 307 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 ABCA12Q86UK0 2595 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 CRYBG3Q68DQ2 2970 aa7.18□□□□□ -1.26
VAPB-206ENST00000520497 WNK2Q9Y3S1 2297 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 TRAV6A0A075B6T7 132 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 HMX3A6NHT5 357 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 POM121CA8CG34 1229 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 WNT9BO14905 357 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 RLN1P04808 185 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 SOD3P08294 240 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 EGR1P18146 543 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 NAT1P18440 290 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 TNFRSF1AP19438 455 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 BTCP35070 178 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 CCR6P51684 374 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 TAS2R31P59538 309 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 TSPAN5P62079 268 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 SNRPD2P62316 118 aaKnown RBP7.17□□□□□ -1.26
VAPB-206ENST00000520497 CCL8P80075 99 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 SMIM21Q3B7S5 101 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 SCGB2B2Q4G0G5 96 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 SPIN3Q5JUX0 258 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 VAX1Q5SQQ9 334 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 Q6P435 159 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 C11orf88Q6PI97 169 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 C6orf201Q7Z4U5 140 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 MOGAT3Q86VF5 341 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 HOGA1Q86XE5 327 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 FAM90A1Q86YD7 464 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 BEST4Q8NFU0 473 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 LRRC29Q8WV35 223 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 SNAPC3Q92966 411 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms