RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 CXorf65A6NEN9 183 aa12.88□□□□□ -0.35
TTC3-219ENST00000485402 ANKUB1A6NFN9 424 aa12.88□□□□□ -0.35
TTC3-219ENST00000485402 CRYM-AS1A6NIL9 109 aa12.88□□□□□ -0.35
TTC3-219ENST00000485402 CTSDP07339 412 aaPredicted RBP12.88□□□□□ -0.35
TTC3-219ENST00000485402 PTGDSP41222 190 aa12.88□□□□□ -0.35
TTC3-219ENST00000485402 RHEBQ15382 184 aa12.88□□□□□ -0.35
TTC3-219ENST00000485402 SPNS3Q6ZMD2 512 aa12.88□□□□□ -0.35
TTC3-219ENST00000485402 VASH2Q86V25 355 aa12.88□□□□□ -0.35
TTC3-219ENST00000485402 LYZL4Q96KX0 146 aa12.88□□□□□ -0.35
TTC3-219ENST00000485402 FBLN5Q9UBX5 448 aa12.88□□□□□ -0.35
TTC3-219ENST00000485402 AK3Q9UIJ7 227 aa12.88□□□□□ -0.35
TTC3-219ENST00000485402 RUNX1Q01196 453 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 ZP4Q12836 540 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 HNF4GQ14541 408 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 ST8SIA1Q92185 356 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 ZNF724A8MTY0 619 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 GPR137BO60478 399 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 MEGF10Q96KG7 1140 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 MRPL13Q9BYD1 178 aaKnown RBP12.87□□□□□ -0.35
TTC3-219ENST00000485402 TRGC2P03986 189 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 CXCL1P09341 107 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 PGA4P0DJD7 388 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 PGA3P0DJD8 388 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 SLC39A7Q92504 469 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 NAA60Q9H7X0 242 aa12.87□□□□□ -0.35
TTC3-219ENST00000485402 HTR5AP47898 357 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 SLC25A24Q6NUK1 477 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 MARS2Q96GW9 593 aaKnown RBP12.86□□□□□ -0.35
TTC3-219ENST00000485402 NUDT16L1Q9BRJ7 211 aaKnown RBP12.86□□□□□ -0.35
TTC3-219ENST00000485402 SLC2A9Q9NRM0 540 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 A0A1B0GV90 55 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 RBFOX3A6NFN3 312 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 ZNHIT1O43257 154 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 PPIHO43447 177 aaKnown RBP12.86□□□□□ -0.35
TTC3-219ENST00000485402 SSSCA1O60232 199 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 SERPINA7P05543 415 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 FABP4P15090 132 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 ATP6V0CP27449 155 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 DLK1P80370 383 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 TMEM123Q8N131 208 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 FAM89BQ8N5H3 189 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 SCRT1Q9BWW7 348 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 TUBA4BQ9H853 241 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 MOB1AQ9H8S9 216 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 TUBD1Q9UJT1 453 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 EXPH5Q8NEV8 1989 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 DKK1O94907 266 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 PATE4P0C8F1 98 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 PAX6P26367 422 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 RND3P61587 244 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 PIGYQ3MUY2 71 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 LINC00696Q6ZRV3 163 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 CYB561D1Q8N8Q1 229 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 ZDHHC8Q9ULC8 765 aa12.86□□□□□ -0.35
TTC3-219ENST00000485402 MAP1BP46821 2468 aaKnown RBP12.85□□□□□ -0.35
TTC3-219ENST00000485402 H3BP45 60 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 DUSP1P28562 367 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 GPX4P36969 197 aaPredicted RBP12.85□□□□□ -0.35
TTC3-219ENST00000485402 SRSF6Q13247 344 aaKnown RBP12.85□□□□□ -0.35
TTC3-219ENST00000485402 HEPN1Q6WQI6 88 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 ZNF429Q86V71 674 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 Q8WTZ3 238 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 ANAPC10Q9UM13 185 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 UBE2J1Q9Y385 318 aaPredicted RBP12.85□□□□□ -0.35
TTC3-219ENST00000485402 NKX2-6A6NCS4 301 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 GEMIN2O14893 280 aaKnown RBP12.85□□□□□ -0.35
TTC3-219ENST00000485402 HERV-K104P61576 105 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 VAMP2P63027 116 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 NKX6-1P78426 367 aaPredicted RBP12.85□□□□□ -0.35
TTC3-219ENST00000485402 EWSR1Q01844 656 aaKnown RBP eCLIP12.85□□□□□ -0.357e-11■■■□□ 17.4
TTC3-219ENST00000485402 TMEM187Q14656 261 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 SURF2Q15527 256 aaPredicted RBP12.85□□□□□ -0.35
TTC3-219ENST00000485402 DCAF10Q5QP82 559 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 SLC35G3Q8N808 338 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 ZNF610Q8N9Z0 462 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 HDGFL3Q9Y3E1 203 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 IFITM10A6NMD0 228 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 ZNF729A6NN14 1252 aaPredicted RBP12.85□□□□□ -0.35
TTC3-219ENST00000485402 PPP1R2P9O14990 202 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 TRAF3IP2O43734 574 aaPredicted RBP12.85□□□□□ -0.35
TTC3-219ENST00000485402 CEACAM1P13688 526 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 HOXA5P20719 270 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 CSNK1A1P48729 337 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 SPINK14Q6IE38 97 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 SSX9Q7RTT3 188 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 OR2M3Q8NG83 312 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 LYPD6BQ8NI32 183 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 ZNF442Q9H7R0 627 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 DMRT1Q9Y5R6 373 aa12.85□□□□□ -0.35
TTC3-219ENST00000485402 HSPB6O14558 160 aa12.84□□□□□ -0.35
TTC3-219ENST00000485402 TLX3O43711 291 aaPredicted RBP12.84□□□□□ -0.35
TTC3-219ENST00000485402 SLC34A2O95436 690 aa12.84□□□□□ -0.35
TTC3-219ENST00000485402 P04436 131 aa12.84□□□□□ -0.35
TTC3-219ENST00000485402 MSX1P28360 303 aa12.84□□□□□ -0.35
TTC3-219ENST00000485402 CDX1P47902 265 aaPredicted RBP12.84□□□□□ -0.35
TTC3-219ENST00000485402 OR2T2Q6IF00 324 aa12.84□□□□□ -0.35
TTC3-219ENST00000485402 LGI3Q8N145 548 aa12.84□□□□□ -0.35
TTC3-219ENST00000485402 COMMD1Q8N668 190 aa12.84□□□□□ -0.35
TTC3-219ENST00000485402 PSMF1Q92530 271 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms