RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 C9orf106Q8NAJ2 232 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 PHYHIPLQ96FC7 376 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 GALNT14Q96FL9 552 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 Q9N2K0 584 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 KCNIP3Q9Y2W7 256 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 INTS1Q8N201 2190 aaKnown RBP11.11□□□□□ -0.63
SEC13-216ENST00000479868 MGAQ8IWI9 3026 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 PRSS44E7EML9 344 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 SCO1O75880 301 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 PPYP01298 95 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 SCTP09683 121 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 KIR2DL2P43627 348 aaPredicted RBP11.1□□□□□ -0.63
SEC13-216ENST00000479868 IL24Q13007 206 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 SNTB1Q13884 538 aaKnown RBP11.1□□□□□ -0.63
SEC13-216ENST00000479868 Q6ZS49 121 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 SLC38A6Q8IZM9 456 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 PRSS33Q8NF86 280 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 LRRC20Q8TCA0 184 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 NEK7Q8TDX7 302 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 LINC00052Q96N35 136 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 OR51I2Q9H344 312 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 NARFLQ9H6Q4 476 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 UCP3P55916 312 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 HERV-K104P61576 105 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 PPP1CBP62140 327 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 HERPUD1Q15011 391 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 ALKBH6Q3KRA9 238 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 WDR86Q86TI4 376 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 SUMF2Q8NBJ7 301 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 AQP10Q96PS8 301 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 TAAR6Q96RI8 345 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 RSRP1Q9BUV0 290 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 CDH20Q9HBT6 801 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 BARX1Q9HBU1 254 aaPredicted RBP11.1□□□□□ -0.63
SEC13-216ENST00000479868 MEMO1Q9Y316 297 aa11.1□□□□□ -0.63
SEC13-216ENST00000479868 GTF3C1Q12789 2109 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 LGALS8O00214 317 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 HS3ST1O14792 307 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 BET1O15155 118 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 CEACAM4O75871 244 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 CRYZL1O95825 349 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 PET100P0DJ07 73 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 FOXF2Q12947 444 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 PAN3Q58A45 887 aaKnown RBP11.09□□□□□ -0.63
SEC13-216ENST00000479868 C20orf204Q6ZNR8 217 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 FAM58AQ8N1B3 248 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 STOML3Q8TAV4 291 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 GLYATL2Q8WU03 294 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 RDH5Q92781 318 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 CNTNAP3BQ96NU0 1288 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 CNTNAP3Q9BZ76 1288 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 TUBD1Q9UJT1 453 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 TRAV24A0A0B4J272 114 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 ZNF891A8MT65 544 aaPredicted RBP11.09□□□□□ -0.63
SEC13-216ENST00000479868 A8MXK9 166 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 J3QW42 95 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 IFNA21P01568 189 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 FGF2P09038 288 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 MRPL49Q13405 166 aaKnown RBP11.09□□□□□ -0.63
SEC13-216ENST00000479868 ALKBH2Q6NS38 261 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 LYZL2Q7Z4W2 148 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 SARAFQ96BY9 339 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 MSI2Q96DH6 328 aaKnown RBP11.09□□□□□ -0.63
SEC13-216ENST00000479868 PKIBQ9C010 78 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 PLK3Q9H4B4 646 aa11.09□□□□□ -0.63
SEC13-216ENST00000479868 CEP250Q9BV73 2442 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 IGKV1-6A0A0C4DH72 117 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 PRR33A8MZF0 331 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 AGFG2O95081 481 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 NUP62P37198 522 aaPredicted RBP11.08□□□□□ -0.64
SEC13-216ENST00000479868 NOVA1P51513 510 aaKnown RBP11.08□□□□□ -0.64
SEC13-216ENST00000479868 SRSF7Q16629 238 aaKnown RBP eCLIP11.08□□□□□ -0.64
SEC13-216ENST00000479868 LINC00596Q86U02 117 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 CCDC36Q8IYA8 594 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 BVESQ8NE79 360 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 SLC25A40Q8TBP6 338 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 SUCNR1Q9BXA5 334 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 SHARPINQ9H0F6 387 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 MUC6Q6W4X9 2439 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 GVINP1Q7Z2Y8 2422 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 IGHV3-64DA0A0J9YX35 117 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 J3QT63 122 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 TPT1P13693 172 aaKnown RBP11.08□□□□□ -0.64
SEC13-216ENST00000479868 ZP3P21754 424 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 GNRHRP30968 328 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 UCP2P55851 309 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 ACSF3Q4G176 576 aaPredicted RBP11.08□□□□□ -0.64
SEC13-216ENST00000479868 FAM76BQ5HYJ3 339 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 INO80CQ6PI98 192 aaPredicted RBP11.08□□□□□ -0.64
SEC13-216ENST00000479868 LIAT1Q6ZQX7 453 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 HSD17B13Q7Z5P4 300 aaPredicted RBP11.08□□□□□ -0.64
SEC13-216ENST00000479868 BAP18Q8IXM2 172 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 LRTM2Q8N967 370 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 LHFPL5Q8TAF8 219 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 MRPL30Q8TCC3 161 aaKnown RBP11.08□□□□□ -0.64
SEC13-216ENST00000479868 WNT2BQ93097 391 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 TP53RKQ96S44 253 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 SYT3Q9BQG1 590 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 RTL8AQ9BWD3 113 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms