RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ELP2Q6IA86 826 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 DHRSXQ8N5I4 330 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 PXT1Q8NFP0 134 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 TMEM106AQ96A25 262 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 SMIM19Q96E16 107 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 COQ2Q96H96 371 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 CLEC7AQ9BXN2 247 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 NPFFR1Q9GZQ6 430 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 GAL3ST2Q9H3Q3 398 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 CLEC2DQ9UHP7 191 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 TCF19Q9Y242 345 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 MINOS1-NBL1R4GNA1 71 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 ODAMA1E959 279 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 OGG1O15527 345 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 LALBAP00709 142 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 KIR2DS4P43632 304 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 RAB13P51153 203 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 EFNB2P52799 333 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 ATXN7L3Q14CW9 347 aaPredicted RBP15.27■□□□□ 0.04
COL5A1-203ENST00000460264 PRAMEF5Q5TYX0 476 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 TNFAIP8L1Q8WVP5 186 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 CORO2AQ92828 525 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 GPER1Q99527 375 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 ABCB10Q9NRK6 738 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 BABAM2Q9NXR7 383 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 TAS2R3Q9NYW6 316 aa15.27■□□□□ 0.04
COL5A1-203ENST00000460264 DEGS1O15121 323 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 MAGEB3O15480 346 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 GNAO1P09471 354 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 JUNBP17275 347 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-203ENST00000460264 DYNLT3P51808 116 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 KRBOX4Q5JUW0 171 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 CCBE1Q6UXH8 406 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-203ENST00000460264 BAIAP2L2Q6UXY1 529 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 HEPN1Q6WQI6 88 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 SATL1Q86VE3 508 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 ZNF485Q8NCK3 441 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 OR52N1Q8NH53 320 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 OR2T6Q8NHC8 308 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 NDNFQ8TB73 568 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 TMEM80Q96HE8 168 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 NKX3-1Q99801 234 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-203ENST00000460264 CDCA4Q9BXL8 241 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 FAM192AQ9GZU8 254 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 ZNF281Q9Y2X9 895 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 HILPDAQ9Y5L2 63 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 NOTCH1P46531 2555 aa15.26■□□□□ 0.03
COL5A1-203ENST00000460264 A6NDX4 124 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 H0YJX3 145 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 CDK2P24941 298 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 CAPGP40121 348 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 OR3A4PP47883 348 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 OGFRL1Q5TC84 451 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-203ENST00000460264 DMKNQ6E0U4 476 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-203ENST00000460264 OR52W1Q6IF63 320 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 C11orf88Q6PI97 169 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 TMEM219Q86XT9 240 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 Q8NFD4 153 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 OR51T1Q8NGJ9 327 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 OR4P4Q8NGL7 312 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 OR13C5Q8NGS8 318 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 PPIL3Q9H2H8 161 aaKnown RBP15.25■□□□□ 0.03
COL5A1-203ENST00000460264 MMP27Q9H306 513 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 TMEM138Q9NPI0 162 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 ING3Q9NXR8 418 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 HSPE1-MOB4S4R3N1 261 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 CMYA5Q8N3K9 4069 aa15.25■□□□□ 0.03
COL5A1-203ENST00000460264 HSPB6O14558 160 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 CASQ2O14958 399 aaPredicted RBP15.24■□□□□ 0.03
COL5A1-203ENST00000460264 WIPF1O43516 503 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 TSPAN15O95858 294 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 ALDOBP05062 364 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 HTR1DP28221 377 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 GDNFP39905 211 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 PTGFRP43088 359 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 PPP3R1P63098 170 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 SLC34A1Q06495 639 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 ST3GAL4Q11206 333 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 MED21Q13503 144 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 IL13RA2Q14627 380 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 RSU1Q15404 277 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 PAN3Q58A45 887 aaKnown RBP15.24■□□□□ 0.03
COL5A1-203ENST00000460264 DDI2Q5TDH0 399 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 LAIR2Q6ISS4 152 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 ASCL4Q6XD76 172 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 C8orf59Q8N0T1 100 aaPredicted RBP15.24■□□□□ 0.03
COL5A1-203ENST00000460264 ABHD12Q8N2K0 398 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 OR10K1Q8NGX5 313 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 GGHQ92820 318 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 GHSRQ92847 366 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 NR1H4Q96RI1 486 aaPredicted RBP15.24■□□□□ 0.03
COL5A1-203ENST00000460264 ZNF702PQ9H963 129 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 CHCHD3Q9NX63 227 aaKnown RBP15.24■□□□□ 0.03
COL5A1-203ENST00000460264 PITPNC1Q9UKF7 332 aa15.24■□□□□ 0.03
COL5A1-203ENST00000460264 TRAV24A0A0B4J272 114 aa15.23■□□□□ 0.03
COL5A1-203ENST00000460264 TRBV5-5A0A0J9YX44 114 aa15.23■□□□□ 0.03
COL5A1-203ENST00000460264 FAM172BPA6NC97 362 aa15.23■□□□□ 0.03
COL5A1-203ENST00000460264 EFCAB10A6NFE3 127 aa15.23■□□□□ 0.03
COL5A1-203ENST00000460264 F2RL2O00254 374 aa15.23■□□□□ 0.03
COL5A1-203ENST00000460264 CD34P28906 385 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms