RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SMIM19Q96E16 107 aa16.8■□□□□ 0.28
HSPG2-205ENST00000427897 RAB18Q9NP72 206 aa16.8■□□□□ 0.28
HSPG2-205ENST00000427897 CKLFQ9UBR5 152 aa16.8■□□□□ 0.28
HSPG2-205ENST00000427897 TBL2Q9Y4P3 447 aaKnown RBP16.8■□□□□ 0.28
HSPG2-205ENST00000427897 A0A0G2JK05 382 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 PTGES3LE9PB15 166 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 MYL12BO14950 172 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 HTR3BO95264 441 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 CSTBP04080 98 aaKnown RBP16.79■□□□□ 0.28
HSPG2-205ENST00000427897 PAX6P26367 422 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 TAS2R43P59537 309 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 AESQ08117 197 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 FAM189A2Q15884 450 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 KRBOX4Q5JUW0 171 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 OR52W1Q6IF63 320 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 PXT1Q8NFP0 134 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 LINC01006Q8NI28 216 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 GHSRQ92847 366 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 MALSU1Q96EH3 234 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 TMEM138Q9NPI0 162 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 SESN1Q9Y6P5 492 aa16.79■□□□□ 0.28
HSPG2-205ENST00000427897 PNMA8CA0A1B0GUJ8 204 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 H3BUI4 141 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 GABRPO00591 440 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 CLPXO76031 633 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 CDK1P06493 297 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 CRHBPP24387 322 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 LMO1P25800 156 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 BDKRB2P30411 391 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 ZP1P60852 638 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 SLC35A2P78381 396 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 AANATQ16613 207 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 DDI2Q5TDH0 399 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 RNLSQ5VYX0 342 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 Q6ZSV7 163 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 LHFPL4Q7Z7J7 247 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 ZFP41Q8N8Y5 198 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 OR51A2Q8NGJ7 313 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 NDNFQ8TB73 568 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 WFDC12Q8WWY7 111 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 RGP1Q92546 391 aaPredicted RBP16.78■□□□□ 0.28
HSPG2-205ENST00000427897 YTHDF1Q9BYJ9 559 aaKnown RBP16.78■□□□□ 0.28
HSPG2-205ENST00000427897 DUSP21Q9H596 190 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 ZNF696Q9H7X3 374 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 PCDHB16Q9NRJ7 776 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 ERGIC3Q9Y282 383 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 TENM1Q9UKZ4 2725 aa16.78■□□□□ 0.28
HSPG2-205ENST00000427897 HSPB6O14558 160 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 RGS10O43665 173 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 ALDOBP05062 364 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 ZNF93P35789 620 aaPredicted RBP16.77■□□□□ 0.28
HSPG2-205ENST00000427897 GLIPR1P48060 266 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 SSX2Q16385 188 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 PAN3Q58A45 887 aaKnown RBP16.77■□□□□ 0.28
HSPG2-205ENST00000427897 YIF1BQ5BJH7 314 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 DTX3Q8N9I9 347 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 OR11H6Q8NGC7 330 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 OR4D6Q8NGJ1 314 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 NKX3-1Q99801 234 aaPredicted RBP16.77■□□□□ 0.28
HSPG2-205ENST00000427897 CLEC7AQ9BXN2 247 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 METTL9Q9H1A3 318 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 TMEM133Q9H2Q1 129 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 PAK1IP1Q9NWT1 392 aaPredicted RBP16.77■□□□□ 0.28
HSPG2-205ENST00000427897 TAS2R3Q9NYW6 316 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 SIRT4Q9Y6E7 314 aaPredicted RBP16.77■□□□□ 0.28
HSPG2-205ENST00000427897 ANK2Q01484 3957 aa16.77■□□□□ 0.28
HSPG2-205ENST00000427897 SLC33A1O00400 549 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-205ENST00000427897 C21orf33P30042 268 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-205ENST00000427897 PTGFRP43088 359 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 SRSF4Q08170 494 aaKnown RBP16.76■□□□□ 0.27
HSPG2-205ENST00000427897 ATXN7L3Q14CW9 347 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-205ENST00000427897 Q499Y3 187 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 ZNF626Q68DY1 528 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 SLC35E4Q6ICL7 350 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 Q6P435 159 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 TCF23Q7RTU1 214 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 OR4C13Q8NGP0 309 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 OR13C5Q8NGS8 318 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 OR10K1Q8NGX5 313 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 RPS4Y2Q8TD47 263 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 MND1Q9BWT6 205 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 CDCA4Q9BXL8 241 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 BARHL1Q9BZE3 327 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 C16orf95Q9H693 158 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 LRRC42Q9Y546 428 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 HILPDAQ9Y5L2 63 aa16.76■□□□□ 0.27
HSPG2-205ENST00000427897 IGHV2-26A0A0B4J1V2 119 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 FAM90A8PA6NJQ4 464 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 TIMM23O14925 209 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 TSPAN9O75954 239 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 LALBAP00709 142 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 CSN2P05814 226 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 CDK2P24941 298 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 OR3A4PP47883 348 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 GABARAPL2P60520 117 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 DMKNQ6E0U4 476 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-205ENST00000427897 ELP2Q6IA86 826 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 ASPHD2Q6ICH7 369 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 ZNF529Q6P280 563 aa16.75■□□□□ 0.27
HSPG2-205ENST00000427897 LIAT1Q6ZQX7 453 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms