RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SPSB4Q96A44 273 aa22.04■■□□□ 1.12
COL13A1-203ENST00000398969 CNTRLQ7Z7A1 2325 aa22.04■■□□□ 1.12
COL13A1-203ENST00000398969 C7orf77A4D0Y5 90 aa22.03■■□□□ 1.12
COL13A1-203ENST00000398969 SNRNP70P08621 437 aaKnown RBP22.03■■□□□ 1.12
COL13A1-203ENST00000398969 MMP7P09237 267 aaPredicted RBP22.03■■□□□ 1.12
COL13A1-203ENST00000398969 GNMTQ14749 295 aa22.03■■□□□ 1.12
COL13A1-203ENST00000398969 BOD1Q96IK1 185 aa22.03■■□□□ 1.12
COL13A1-203ENST00000398969 PLSCR2Q9NRY7 297 aa22.03■■□□□ 1.12
COL13A1-203ENST00000398969 PARPBPQ9NWS1 579 aa22.03■■□□□ 1.12
COL13A1-203ENST00000398969 SHANK1Q9Y566 2161 aa22.03■■□□□ 1.12
COL13A1-203ENST00000398969 MEOX2P50222 304 aa22.03■■□□□ 1.12
COL13A1-203ENST00000398969 EWSR1Q01844 656 aaKnown RBP eCLIP22.03■■□□□ 1.12
COL13A1-203ENST00000398969 CDCP2Q5VXM1 449 aa22.03■■□□□ 1.12
COL13A1-203ENST00000398969 C11orf1Q9H5F2 150 aa22.03■■□□□ 1.12
COL13A1-203ENST00000398969 NKX2-6A6NCS4 301 aa22.02■■□□□ 1.12
COL13A1-203ENST00000398969 TRAPPC6AO75865 159 aa22.02■■□□□ 1.12
COL13A1-203ENST00000398969 Q0VFX4 171 aa22.02■■□□□ 1.12
COL13A1-203ENST00000398969 C1QTNF5Q9BXJ0 243 aa22.02■■□□□ 1.12
COL13A1-203ENST00000398969 TMEM222Q9H0R3 208 aa22.02■■□□□ 1.12
COL13A1-203ENST00000398969 CDS2O95674 445 aa22.01■■□□□ 1.11
COL13A1-203ENST00000398969 ASCL1P50553 236 aa22.01■■□□□ 1.11
COL13A1-203ENST00000398969 CTAG1AP78358 180 aa22.01■■□□□ 1.11
COL13A1-203ENST00000398969 SRPXP78539 464 aa22.01■■□□□ 1.11
COL13A1-203ENST00000398969 CPEB3Q8NE35 698 aaKnown RBP22.01■■□□□ 1.11
COL13A1-203ENST00000398969 ABHD3Q8WU67 409 aa22.01■■□□□ 1.11
COL13A1-203ENST00000398969 IP6K3Q96PC2 410 aa22.01■■□□□ 1.11
COL13A1-203ENST00000398969 USB1Q9BQ65 265 aaKnown RBP22.01■■□□□ 1.11
COL13A1-203ENST00000398969 TRDCB7Z8K6 153 aa22.01■■□□□ 1.11
COL13A1-203ENST00000398969 GNRHRP30968 328 aa22.01■■□□□ 1.11
COL13A1-203ENST00000398969 FAM185AQ8N0U4 392 aa22.01■■□□□ 1.11
COL13A1-203ENST00000398969 R4GN57 208 aa22.01■■□□□ 1.11
COL13A1-203ENST00000398969 MED19A0JLT2 244 aaPredicted RBP22■■□□□ 1.11
COL13A1-203ENST00000398969 C1orf196B1AJZ1 125 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 RPL36A-HNRNPH2H7BZ11 118 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 ZNF44P15621 663 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 RNF212Q495C1 297 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 DCAF12Q5T6F0 453 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 TMEM182Q6ZP80 229 aaPredicted RBP22■■□□□ 1.11
COL13A1-203ENST00000398969 PPP1R32Q7Z5V6 425 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 OR2C3Q8N628 320 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 EXTL1Q92935 676 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 ZNF845Q96IR2 970 aaPredicted RBP22■■□□□ 1.11
COL13A1-203ENST00000398969 PRDM14Q9GZV8 571 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 SLC7A10Q9NS82 523 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 DEPPQ9NTK1 212 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 M0R036 132 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 MT-ND4LP03901 98 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 RPS18P62269 152 aaKnown RBP22■■□□□ 1.11
COL13A1-203ENST00000398969 SNRPEP62304 92 aaKnown RBP22■■□□□ 1.11
COL13A1-203ENST00000398969 DPPA2Q7Z7J5 298 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 Q8NFD4 153 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 POM121Q96HA1 1249 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 C20orf24Q9BUV8 137 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 TUBA4BQ9H853 241 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 LOXL2Q9Y4K0 774 aa22■■□□□ 1.11
COL13A1-203ENST00000398969 FAM24AA6NFZ4 105 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 UMAD1C9J7I0 102 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 K7N7A8 449 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 CYTIPO60759 359 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 FAM86C1Q9NVL1 165 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 EIF3GO75821 320 aaKnown RBP eCLIP21.99■■□□□ 1.11
COL13A1-203ENST00000398969 IGHV3-9P01782 118 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 CD59P13987 128 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 OTX2P32243 289 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 PPP1CCP36873 323 aaKnown RBP21.99■■□□□ 1.11
COL13A1-203ENST00000398969 Q6ZS49 121 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 TBC1D26Q86UD7 250 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 FAM213BQ8TBF2 198 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 TMEM56Q96MV1 263 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 PBDC1Q9BVG4 233 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 FBXO7Q9Y3I1 522 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 TMEM56-RWDD3S4R434 201 aa21.99■■□□□ 1.11
COL13A1-203ENST00000398969 CDX4O14627 284 aaPredicted RBP21.98■■□□□ 1.11
COL13A1-203ENST00000398969 COLCA1Q6ZS62 124 aa21.98■■□□□ 1.11
COL13A1-203ENST00000398969 ISOC2Q96AB3 205 aa21.98■■□□□ 1.11
COL13A1-203ENST00000398969 SLC35B3Q9H1N7 401 aa21.98■■□□□ 1.11
COL13A1-203ENST00000398969 UBE2J1Q9Y385 318 aaPredicted RBP21.98■■□□□ 1.11
COL13A1-203ENST00000398969 IGSF23A1L1A6 192 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A10PA6NDY2 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A18PA6NE21 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A16PA6NEW6 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A20PA6NIJ5 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A8PA6NJQ4 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A7PA6NKC0 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A22PA8MWA6 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A12PA8MX19 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A5PA8MXJ8 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A23PA8MXZ1 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 IGHEP01854 428 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A15PP0C7V4 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A13PP0C7W8 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A14PP0C7W9 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 FAM90A24PP0C7X0 464 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 DAOP14920 347 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 BCL3P20749 454 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 NKX2-1P43699 371 aaPredicted RBP21.97■■□□□ 1.11
COL13A1-203ENST00000398969 C5orf24Q7Z6I8 188 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 SUMF1Q8NBK3 374 aa21.97■■□□□ 1.11
COL13A1-203ENST00000398969 CPNE4Q96A23 557 aaPredicted RBP21.97■■□□□ 1.11
COL13A1-203ENST00000398969 POLR2GP62487 172 aaKnown RBP eCLIP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms