RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 GALEQ14376 348 aa13.28□□□□□ -0.28
PTPRK-208ENST00000392449 CDK5R1Q15078 307 aa13.28□□□□□ -0.28
PTPRK-208ENST00000392449 KPRPQ5T749 579 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-208ENST00000392449 SLC29A1Q99808 456 aa13.28□□□□□ -0.28
PTPRK-208ENST00000392449 ZNF649Q9BS31 505 aa13.28□□□□□ -0.28
PTPRK-208ENST00000392449 GAL3ST2Q9H3Q3 398 aa13.28□□□□□ -0.28
PTPRK-208ENST00000392449 ODAMA1E959 279 aa13.27□□□□□ -0.29
PTPRK-208ENST00000392449 TMEM225BP0DP42 221 aa13.27□□□□□ -0.29
PTPRK-208ENST00000392449 LMO1P25800 156 aa13.27□□□□□ -0.29
PTPRK-208ENST00000392449 KRBOX4Q5JUW0 171 aa13.27□□□□□ -0.29
PTPRK-208ENST00000392449 HEPN1Q6WQI6 88 aa13.27□□□□□ -0.29
PTPRK-208ENST00000392449 NDUFA11Q86Y39 141 aa13.27□□□□□ -0.29
PTPRK-208ENST00000392449 NR1H4Q96RI1 486 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-208ENST00000392449 OCSTAMPQ9BR26 566 aa13.27□□□□□ -0.29
PTPRK-208ENST00000392449 ERVK13-1Q9NX77 482 aa13.27□□□□□ -0.29
PTPRK-208ENST00000392449 DPM3Q9P2X0 92 aa13.27□□□□□ -0.29
PTPRK-208ENST00000392449 DNAH3Q8TD57 4116 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 IGLV1-47P01700 117 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 IGHV3-7P01780 117 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 GTF2A1P52655 376 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-208ENST00000392449 BDH1Q02338 343 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 RBM39Q14498 530 aaKnown RBP13.26□□□□□ -0.29
PTPRK-208ENST00000392449 KISS1Q15726 138 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 ZSCAN26Q16670 478 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 C17orf58Q2M2W7 97 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 Q6ZPA2 131 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 ZBTB49Q6ZSB9 765 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 DTX3Q8N9I9 347 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 OR51A2Q8NGJ7 313 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 CORO2AQ92828 525 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 ZNF581Q9P0T4 197 aa13.26□□□□□ -0.29
PTPRK-208ENST00000392449 DEGS1O15121 323 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 SULT1B1O43704 296 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 PTGFRP43088 359 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 C10orf99Q6UWK7 81 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 SAXO1Q8IYX7 474 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 SYS1Q8N2H4 156 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 OR5AU1Q8NGC0 362 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 OR52I1Q8NGK6 324 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 OR10K1Q8NGX5 313 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 RHOXF1Q8NHV9 184 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 TSEN15Q8WW01 171 aaKnown RBP13.25□□□□□ -0.29
PTPRK-208ENST00000392449 APH1BQ8WW43 257 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 RGP1Q92546 391 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-208ENST00000392449 LEAP2Q969E1 77 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 TAS2R3Q9NYW6 316 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 PCDHGB5Q9Y5G0 923 aa13.25□□□□□ -0.29
PTPRK-208ENST00000392449 SNTNA6NMZ2 147 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 H0YJX3 145 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 LPLP06858 475 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 NFYBP25208 207 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 OR3A4PP47883 348 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 SOX2P48431 317 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 EMX1Q04741 257 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-208ENST00000392449 SMN1Q16637 294 aaKnown RBP13.24□□□□□ -0.29
PTPRK-208ENST00000392449 HLA-DRB5Q30154 266 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 ABCA11PQ4W5N1 156 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 TCTEX1D4Q5JR98 221 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 ZNF691Q5VV52 312 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 XAF1Q6GPH4 301 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 OR52W1Q6IF63 320 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 ZFP1Q6P2D0 407 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 SERPINA12Q8IW75 414 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 PARP16Q8N5Y8 322 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 OR5AK2Q8NH90 309 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 ZNF596Q8TC21 504 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 STMN2Q93045 179 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 SLC25A33Q9BSK2 321 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 DHDHQ9UQ10 334 aa13.24□□□□□ -0.29
PTPRK-208ENST00000392449 TRAV39A0A0B4J263 110 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 TMEM212A6NML5 194 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 BUB1B-PAK6H3BSN5 160 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 GABRPO00591 440 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 FADS2O95864 444 aaKnown RBP13.23□□□□□ -0.29
PTPRK-208ENST00000392449 AMY1AP04745 511 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 AMY2AP04746 511 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 CSN2P05814 226 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 CD34P28906 385 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 GLP1RP43220 463 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 PIGYQ3MUY2 71 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 TPTE2P1Q5T6R2 138 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 RTN4RL2Q86UN3 420 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 SATL1Q86VE3 508 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 OR4F17Q8NGA8 305 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 OR4D6Q8NGJ1 314 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 OR5D14Q8NGL3 314 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 OR13A1Q8NGR1 328 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 OR4F4Q96R69 305 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 TAS2R4Q9NYW5 299 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 KIF25Q9UIL4 384 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 TRAV24A0A0B4J272 114 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 FUOMA2VDF0 154 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 LEUTXA8MZ59 168 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 LY6LH3BQJ8 138 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 TOR1AO14656 332 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 LIMS3P0CW19 117 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 LIMS4P0CW20 117 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 CD83Q01151 205 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 LTC4SQ16873 150 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 PAN3Q58A45 887 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms