RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 TUSC1Q2TAM9 212 aa13.1□□□□□ -0.31
CHD4-201ENST00000357008 Q6ZS52 159 aa13.1□□□□□ -0.31
CHD4-201ENST00000357008 BTAF1O14981 1849 aa13.1□□□□□ -0.31
CHD4-201ENST00000357008 LINC01565O15544 149 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 NTN1O95631 604 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 OR10J1P30954 320 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 ACER2Q5QJU3 275 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 C1QL3Q5VWW1 255 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 DHRS11Q6UWP2 260 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 OR5AU1Q8NGC0 362 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 CA10Q9NS85 328 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 OR6C3Q9NZP0 311 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 ITGB4P16144 1822 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 C2CD4DB7Z1M9 353 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 DRD3P35462 400 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 LIPT2A6NK58 231 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 MKRN2OSH3BPM6 223 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 BCL3P20749 454 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 RAC3P60763 192 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 HIST3H3Q16695 136 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 C1QTNF12Q5T7M4 302 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 SPNS3Q6ZMD2 512 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 GAPTQ8N292 157 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 ADAD2Q8NCV1 583 aaKnown RBP13.09□□□□□ -0.31
CHD4-201ENST00000357008 TRAV17A0A0B4J275 112 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 PATE4P0C8F1 98 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 NAAAQ02083 359 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 SLC35E3Q7Z769 313 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 DYRK2Q92630 601 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 RPEQ96AT9 228 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 TRPM3Q9HCF6 1732 aaPredicted RBP13.09□□□□□ -0.31
CHD4-201ENST00000357008 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 hADV38S2A0JD32 116 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 GALNSP34059 522 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 TMEM211Q6ICI0 200 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 TMEM65Q6PI78 240 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 LYPD8Q6UX82 237 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 DTD1Q8TEA8 209 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 RAB24Q969Q5 203 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 FBXO17Q96EF6 278 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 SMDT1Q9H4I9 107 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 FAM60AQ9NP50 221 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 PLA2G3Q9NZ20 509 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 F5P12259 2224 aa13.09□□□□□ -0.31
CHD4-201ENST00000357008 GEMIN2O14893 280 aaKnown RBP13.08□□□□□ -0.31
CHD4-201ENST00000357008 VSIG8P0DPA2 414 aa13.08□□□□□ -0.31
CHD4-201ENST00000357008 C16orf47Q6ZP98 133 aaPredicted RBP13.08□□□□□ -0.31
CHD4-201ENST00000357008 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.31
CHD4-201ENST00000357008 FUT9Q9Y231 359 aa13.08□□□□□ -0.31
CHD4-201ENST00000357008 PDE6DO43924 150 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 PGA4P0DJD7 388 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 PGA5P0DJD9 388 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 SMUG1Q53HV7 270 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 TGIF2LXQ8IUE1 241 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 PTX4Q96A99 478 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 R3HDM4Q96D70 268 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 POM121Q96HA1 1249 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 SULT1A2P50226 295 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 OVCH2Q7RTZ1 564 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 UBALD2Q8IYN6 164 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 SF3B5Q9BWJ5 86 aaKnown RBP13.08□□□□□ -0.32
CHD4-201ENST00000357008 CXXC4Q9H2H0 198 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 SRD5A3Q9H8P0 318 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 DOK5Q9P104 306 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 KIF13AQ9H1H9 1805 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 CD1AP06126 327 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 ZNF766Q5HY98 468 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 DPPA3Q6W0C5 159 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 PDPNQ86YL7 162 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 UBE2V2Q15819 145 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 GHITMQ9H3K2 345 aa13.08□□□□□ -0.32
CHD4-201ENST00000357008 CRYABP02511 175 aaKnown RBP13.07□□□□□ -0.32
CHD4-201ENST00000357008 ANKRD55Q3KP44 614 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 RNF133Q8WVZ7 376 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 HSD17B10Q99714 261 aaKnown RBP13.07□□□□□ -0.32
CHD4-201ENST00000357008 IER2Q9BTL4 223 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 SHISA7A6NL88 538 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 PPOXP50336 477 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 MMP16P51512 607 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 GUSBP11Q6P575 273 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 ZNF880Q6PDB4 577 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 LYZL2Q7Z4W2 148 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 TDHQ8IZJ6 230 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 VSTM2AQ8TAG5 236 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 CCL2P13500 99 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 A0A1W2PR80 420 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 BMI1P35226 326 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 ZNF83P51522 516 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 GPA33Q99795 319 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 CCL28Q9NRJ3 127 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 MYO7AQ13402 2215 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 A0A1B0GU03 582 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 NKX2-6A6NCS4 301 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 DEDDO75618 318 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 MEOX1P50221 254 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 OR1L6Q8NGR2 347 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 THYN1Q9P016 225 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 MEX3AA1L020 520 aaKnown RBP13.07□□□□□ -0.32
CHD4-201ENST00000357008 OOEPA6NGQ2 149 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms