RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TAS2R4Q9NYW5 299 aa4.67□□□□□ -1.66
TOPBP1-201ENST00000260810 IFNL4K9M1U5 179 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 ADH4P08319 380 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF250P15622 560 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 GALP22466 123 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 PTGFRP43088 359 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 CSNK1A1P48729 337 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 PPA1Q15181 289 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 CEACAM16Q2WEN9 425 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 NKAPLQ5M9Q1 402 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 OR4S1Q8NGB4 309 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 NANPQ8TBE9 248 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 FGGYQ96C11 551 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 FBXO7Q9Y3I1 522 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 TEX13DA0A0J9YY54 714 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 BOLA2-SMG1P6H3BVE0 249 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 RAB3AP20336 220 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 TAGLN2P37802 199 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF154Q13106 437 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 FAM162BQ5T6X4 162 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF826PQ6ZT77 177 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 HAPLN4Q86UW8 402 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 SERPINA12Q8IW75 414 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 NKAIN3Q8N8D7 197 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 OR6K6Q8NGW6 343 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 OR5P3Q8WZ94 311 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 ZBTB8AQ96BR9 441 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 TPK1Q9H3S4 243 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 METTL8Q9H825 291 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 LINC00574Q9H8X3 128 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 PCDHB10Q9UN67 800 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 N6AMT1Q9Y5N5 214 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 A0A075B6Q4 140 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 TRAV1-2A0A0B4J238 106 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF891A8MT65 544 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 FAM25EA8MYX2 175 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 PRH1P02810 166 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 OR2T7P0C7T2 308 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 CD53P19397 219 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 EPHA1P21709 976 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 HMGN3Q15651 99 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 SFXN4Q6P4A7 337 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 UNQ6494/PRO21346Q6UXR6 183 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 Q6ZT83 130 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 MKXQ8IYA7 352 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 OR13C3Q8NGS6 347 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 OR2T27Q8NH04 317 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 DEDD2Q8WXF8 326 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 ST6GALNAC6Q969X2 333 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 TMEM68Q96MH6 324 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 PRRT1Q99946 306 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 KLHL9Q9P2J3 617 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 VWC2LB2RUY7 222 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 SOX15O60248 233 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 RBBP9O75884 186 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 SNCGO76070 127 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 IKZF1Q13422 519 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 ZNF585BQ52M93 769 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 OR51E1Q8TCB6 317 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 RAB40AQ8WXH6 277 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 SLAMF6Q96DU3 332 aa4.66□□□□□ -1.66
TOPBP1-201ENST00000260810 LYZL6O75951 148 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 CA6P23280 308 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 NFYAP23511 347 aaPredicted RBP4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 SUB1P53999 127 aaKnown RBP eCLIP4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 ODF4Q2M2E3 257 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 LYPD2Q6UXB3 125 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 DUSP18Q8NEJ0 188 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 OXGR1Q96P68 337 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 FYTTD1Q96QD9 318 aaKnown RBP4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 OR5B2Q96R09 309 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 PATZ1Q9HBE1 687 aaKnown RBP4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 DYNLRB1Q9NP97 96 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 ETV7Q9Y603 341 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 TRAV39A0A0B4J263 110 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 IGHV3-64DA0A0J9YX35 117 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 SMCO3A2RU48 225 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 NUDT19A8MXV4 375 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 SLC22A5O76082 557 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 CCR9P51686 369 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 C17orf58Q2M2W7 97 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 C9orf135Q5VTT2 229 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 OR5D14Q8NGL3 314 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 Q96M66 194 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 TMED9Q9BVK6 235 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 RIMS4Q9H426 269 aaPredicted RBP4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 PLK3Q9H4B4 646 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 RBFOX1Q9NWB1 397 aaKnown RBP4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 AK6Q9Y3D8 172 aaKnown RBP4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 AUP1Q9Y679 476 aa4.65□□□□□ -1.66
TOPBP1-201ENST00000260810 IGHV2OR16-5A0A0B4J2B6 119 aa4.65□□□□□ -1.67
TOPBP1-201ENST00000260810 RAB19A4D1S5 217 aa4.65□□□□□ -1.67
TOPBP1-201ENST00000260810 KLK10O43240 276 aa4.65□□□□□ -1.67
TOPBP1-201ENST00000260810 MMP9P14780 707 aa4.65□□□□□ -1.67
TOPBP1-201ENST00000260810 CCL11P51671 97 aa4.65□□□□□ -1.67
TOPBP1-201ENST00000260810 PAX9P55771 341 aa4.65□□□□□ -1.67
TOPBP1-201ENST00000260810 RPL23AP62750 156 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-201ENST00000260810 TBC1D28Q2M2D7 210 aa4.65□□□□□ -1.67
TOPBP1-201ENST00000260810 OR52W1Q6IF63 320 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms