RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PLAC9Q5JTB6 97 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 STUMQ69YW2 141 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 SIGIRRQ6IA17 410 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 MAPK1IP1LQ8NDC0 245 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 ARHGAP5-AS1Q96IT6 56 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 ZMAT3Q9HA38 289 aaKnown RBP17.26■□□□□ 0.35
RTCA-201ENST00000260563 ZNF581Q9P0T4 197 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 FLNAP21333 2647 aaKnown RBP17.26■□□□□ 0.35
RTCA-201ENST00000260563 CREBBPQ92793 2442 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 OR2AT4A6NND4 320 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 KNG1P01042 644 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 IGHV2-5P01817 119 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 GNB3P16520 340 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 ZNF260Q3ZCT1 412 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 CDNFQ49AH0 187 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 NKAPLQ5M9Q1 402 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 OR5T2Q8NGG2 359 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 NEDD4LQ96PU5 975 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 SDHCQ99643 169 aaPredicted RBP17.26■□□□□ 0.35
RTCA-201ENST00000260563 ZNF665Q9H7R5 613 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 AUNIPQ9H7T9 357 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 MIOXQ9UGB7 285 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 GLS2Q9UI32 602 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 ABCA2Q9BZC7 2435 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 NKX6-3A6NJ46 265 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 CTDSPLO15194 276 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 PDCD6O75340 191 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 PTHLHP12272 177 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 HIST1H1DP16402 221 aaKnown RBP17.25■□□□□ 0.35
RTCA-201ENST00000260563 CHATP28329 748 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 ATAD3CQ5T2N8 411 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 NLRC3Q7RTR2 1065 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 RTN4RL2Q86UN3 420 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 CIARTQ8N365 385 aaPredicted RBP17.25■□□□□ 0.35
RTCA-201ENST00000260563 GDPD1Q8N9F7 314 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 PECRQ9BY49 303 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 IFT22Q9H7X7 185 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 PATZ1Q9HBE1 687 aaKnown RBP17.25■□□□□ 0.35
RTCA-201ENST00000260563 PLEKHJ1Q9NW61 149 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 OR14J1Q9UGF5 321 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 HSF4Q9ULV5 492 aa17.25■□□□□ 0.35
RTCA-201ENST00000260563 CELSR1Q9NYQ6 3014 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 H3BUI4 141 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 MFNGO00587 321 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 SH2D1BO14796 132 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 SMAD7O15105 426 aaKnown RBP17.24■□□□□ 0.35
RTCA-201ENST00000260563 DEGS1O15121 323 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 TMPRSS2O15393 492 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 ADAM20O43506 726 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 HAND1O96004 215 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 GSTP1P09211 210 aaKnown RBP17.24■□□□□ 0.35
RTCA-201ENST00000260563 PSG2P11465 335 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 FUT3P21217 361 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 IL2RGP31785 369 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 GABRA2P47869 451 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 SCN1BQ07699 218 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 ARL6IP1Q15041 203 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 Q6P435 159 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 SLC36A1Q7Z2H8 476 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 C6orf201Q7Z4U5 140 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 OR8B3Q8NGG8 313 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 ANGPTL6Q8NI99 470 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 GCDHQ92947 438 aaPredicted RBP17.24■□□□□ 0.35
RTCA-201ENST00000260563 COX4I2Q96KJ9 171 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 OR8B2Q96RD0 313 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 CCDC32Q9BV29 185 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 DNTTIP1Q9H147 329 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 SPACA1Q9HBV2 294 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 RCC2Q9P258 522 aaKnown RBP17.24■□□□□ 0.35
RTCA-201ENST00000260563 KCNK7Q9Y2U2 307 aa17.24■□□□□ 0.35
RTCA-201ENST00000260563 IGKV1D-17A0A075B6S4 117 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 TMEM235A6NFC5 223 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 RFPL4AA6NLU0 287 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 F5H0A9 414 aaPredicted RBP17.23■□□□□ 0.35
RTCA-201ENST00000260563 RFPL4AL1F8VTS6 287 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 OR2H2O95918 312 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 ZNF44P15621 663 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 LMO4P61968 165 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 MRPS10P82664 201 aaKnown RBP17.23■□□□□ 0.35
RTCA-201ENST00000260563 LYPD2Q6UXB3 125 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 Q8N402 240 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 BORCS5Q969J3 196 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 NEIL1Q96FI4 390 aaPredicted RBP17.23■□□□□ 0.35
RTCA-201ENST00000260563 CCL13Q99616 98 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.23■□□□□ 0.35
RTCA-201ENST00000260563 ZNF222Q9UK12 451 aa17.23■□□□□ 0.35
RTCA-201ENST00000260563 MELTFP08582 738 aa17.22■□□□□ 0.35
RTCA-201ENST00000260563 PRSS3P35030 304 aa17.22■□□□□ 0.35
RTCA-201ENST00000260563 CEBPDP49716 269 aaPredicted RBP17.22■□□□□ 0.35
RTCA-201ENST00000260563 ST8SIA4Q92187 359 aa17.22■□□□□ 0.35
RTCA-201ENST00000260563 CYYR1Q96J86 154 aa17.22■□□□□ 0.35
RTCA-201ENST00000260563 KAAG1Q9UBP8 84 aa17.22■□□□□ 0.35
RTCA-201ENST00000260563 ELF5Q9UKW6 265 aaPredicted RBP17.22■□□□□ 0.35
RTCA-201ENST00000260563 TRAV24A0A0B4J272 114 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 SERPINE3A8MV23 424 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 GABARAPH6UMI1 98 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 SIRPB1O00241 398 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 TNFRSF13BO14836 293 aaPredicted RBP17.21■□□□□ 0.35
RTCA-201ENST00000260563 TFF1P04155 84 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 DGCR2P98153 550 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms