RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 GLP1RP43220 463 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 RGS7BPQ6MZT1 257 aaPredicted RBP11.67□□□□□ -0.54
NEK3-205ENST00000610828 OR5T2Q8NGG2 359 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 NEK7Q8TDX7 302 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 POM121Q96HA1 1249 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 C2orf50Q96LR7 162 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 ZNF488Q96MN9 340 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 DHRS9Q9BPW9 319 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 PRR33A8MZF0 331 aa11.66□□□□□ -0.54
NEK3-205ENST00000610828 ZNF250P15622 560 aa11.66□□□□□ -0.54
NEK3-205ENST00000610828 GNG3P63215 75 aa11.66□□□□□ -0.54
NEK3-205ENST00000610828 MRPL49Q13405 166 aaKnown RBP11.66□□□□□ -0.54
NEK3-205ENST00000610828 RAB32Q13637 225 aa11.66□□□□□ -0.54
NEK3-205ENST00000610828 FAM74A1Q5RGS3 127 aa11.66□□□□□ -0.54
NEK3-205ENST00000610828 UNQ6126/PRO20091Q6UXV3 157 aa11.66□□□□□ -0.54
NEK3-205ENST00000610828 ZNF573Q86YE8 665 aa11.66□□□□□ -0.54
NEK3-205ENST00000610828 C17orf50Q8WW18 174 aa11.66□□□□□ -0.54
NEK3-205ENST00000610828 C1QTNF6Q9BXI9 259 aa11.66□□□□□ -0.54
NEK3-205ENST00000610828 OR5AC2Q9NZP5 309 aa11.66□□□□□ -0.54
NEK3-205ENST00000610828 OR5B21A6NL26 309 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 TEX46H3BTG2 121 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 AQP7O14520 342 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 NOVA1P51513 510 aaKnown RBP11.65□□□□□ -0.54
NEK3-205ENST00000610828 RBM39Q14498 530 aaKnown RBP11.65□□□□□ -0.54
NEK3-205ENST00000610828 TSC22D1Q15714 1073 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 IGFBP7Q16270 282 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 PHLDA2Q53GA4 152 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 IGSF11Q5DX21 431 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 Q6ZT83 130 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 PDZD9Q8IXQ8 264 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 RTN4IP1Q8WWV3 396 aaPredicted RBP11.65□□□□□ -0.54
NEK3-205ENST00000610828 RBPMSQ93062 196 aaKnown RBP11.65□□□□□ -0.54
NEK3-205ENST00000610828 SARAFQ96BY9 339 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 RRNAD1Q96FB5 475 aaKnown RBP11.65□□□□□ -0.54
NEK3-205ENST00000610828 DMRTA2Q96SC8 542 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 CDH20Q9HBT6 801 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 SDHAF2Q9NX18 166 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 KCNIP3Q9Y2W7 256 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 SHANK1Q9Y566 2161 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 RIF1Q5UIP0 2472 aaKnown RBP11.65□□□□□ -0.54
NEK3-205ENST00000610828 TRBV6-7A0A0A0MS04 114 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 ZNF891A8MT65 544 aaPredicted RBP11.65□□□□□ -0.54
NEK3-205ENST00000610828 SMPD2O60906 423 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 S100A10P60903 97 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 HERV-K104P61576 105 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 MPV17LQ2QL34 196 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 SP6Q3SY56 376 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 FAM209AQ5JX71 171 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 VWA1Q6PCB0 445 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 PRSS54Q6PEW0 395 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 FOXRED2Q8IWF2 684 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 POC1AQ8NBT0 407 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 PRSS33Q8NF86 280 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 OR1S1Q8NH92 325 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 OR2J1Q9GZK6 312 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 SLC2A9Q9NRM0 540 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 PFDN2Q9UHV9 154 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 MEMO1Q9Y316 297 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 KCNMB2Q9Y691 235 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 ESPL1Q14674 2120 aa11.65□□□□□ -0.54
NEK3-205ENST00000610828 ERVS71-1P61550 626 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 PPP1CBP62140 327 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 GABRA6Q16445 453 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 IAH1Q2TAA2 248 aaPredicted RBP11.64□□□□□ -0.55
NEK3-205ENST00000610828 C9orf106Q8NAJ2 232 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 LRRC20Q8TCA0 184 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 MARVELD3Q96A59 401 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 MOB3AQ96BX8 217 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 NARFLQ9H6Q4 476 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 NAA60Q9H7X0 242 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 RCC2Q9P258 522 aaKnown RBP11.64□□□□□ -0.55
NEK3-205ENST00000610828 ARID1AO14497 2285 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 ZFHX2Q9C0A1 2572 aaPredicted RBP11.64□□□□□ -0.55
NEK3-205ENST00000610828 PRSS44E7EML9 344 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 C3orf80F5H4A9 247 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 SCO1O75880 301 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 OR5AC1P0C628 307 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 PET100P0DJ07 73 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 GLI4P10075 376 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 AADACP22760 399 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 NUP62P37198 522 aaPredicted RBP11.64□□□□□ -0.55
NEK3-205ENST00000610828 C5orf24Q7Z6I8 188 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 C17orf78Q8N4C9 275 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 PIK3IP1Q96FE7 263 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 SLC25A32Q9H2D1 315 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
NEK3-205ENST00000610828 DSPP15924 2871 aaKnown RBP11.64□□□□□ -0.55
NEK3-205ENST00000610828 MFSD2BA6NFX1 497 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 ZSCAN5BA6NJL1 495 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 BET1O15155 118 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 SHOXO15266 292 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 RHBDL1O75783 438 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 NAPSAO96009 420 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 PPYP01298 95 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 IFNA21P01568 189 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 CEACAM1P13688 526 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 HOXC12P31275 282 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 KIR2DL2P43627 348 aaPredicted RBP11.63□□□□□ -0.55
NEK3-205ENST00000610828 IL24Q13007 206 aa11.63□□□□□ -0.55
NEK3-205ENST00000610828 GUSBP1Q15486 140 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms