RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 LTC4SQ16873 150 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 DEFB136Q30KP8 78 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 NKAPLQ5M9Q1 402 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 TPTE2P1Q5T6R2 138 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 LCN1P1Q5VSP4 162 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 MEPCEQ7L2J0 689 aaKnown RBP6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 OR2W3Q7Z3T1 314 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 PRSS35Q8N3Z0 413 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 TCEANCQ8N8B7 351 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 YIPF7Q8N8F6 280 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 KLHL30-AS1Q8NEE0 82 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 OR5D18Q8NGL1 313 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 ASB17Q8WXJ9 295 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 LRGUKQ96M69 825 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 RBM14Q96PK6 669 aaKnown RBP6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 IL4I1Q96RQ9 567 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 PLEKHA1Q9HB21 404 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 SLC7A11Q9UPY5 501 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 GSTK1Q9Y2Q3 226 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 ARL2BPQ9Y2Y0 163 aa6.84□□□□□ -1.31
SHKBP1-220ENST00000599716 IGKV1-9A0A0C4DH69 117 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 IGKV1-12A0A0C4DH73 117 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 A0A1W2PQL4 384 aaPredicted RBP6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 E9PQ18 207 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 ZNF670-ZNF695F2Z2N8 137 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 BUB1B-PAK6H3BSN5 160 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 HSPB6O14558 160 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 SYT7O43581 403 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 ENTPD6O75354 484 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 CLIC3O95833 236 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 IGKV1D-12P01611 117 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 IGLV1-47P01700 117 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 T-ENOLP0DO92 83 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 NFYBP25208 207 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 KIR3DL2P43630 455 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 CRISP1P54107 249 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 RPL23AP62750 156 aaKnown RBP6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 ATXN7L3Q14CW9 347 aaPredicted RBP6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 PTGES3Q15185 160 aaKnown RBP6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 SPATS1Q496A3 300 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 PIGWQ7Z7B1 504 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 CATSPERDQ86XM0 798 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 FAM58AQ8N1B3 248 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 OSR2Q8N2R0 312 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 OR56B4Q8NH76 319 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 ASB9Q96DX5 294 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 ADAT3Q96EY9 351 aaPredicted RBP6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 BORCS8Q96FH0 119 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 COQ2Q96H96 371 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 THTPAQ9BU02 230 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 PPIL3Q9H2H8 161 aaKnown RBP6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 MED4Q9NPJ6 270 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 NDE1Q9NXR1 346 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 HHLA2Q9UM44 414 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 SNX5Q9Y5X3 404 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 TMEM14AQ9Y6G1 99 aa6.83□□□□□ -1.32
SHKBP1-220ENST00000599716 TRAV39A0A0B4J263 110 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 LOC107986453A0A1B0GWG9 222 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 A0A1W2PPE3 182 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 LEUTXA8MZ59 168 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 H0YHG0 523 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 LY6LH3BQJ8 138 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 MGST3O14880 152 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 DCTN3O75935 186 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 OR2H2O95918 312 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 CCL1P22362 96 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 BRS3P32247 399 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 FUT6P51993 359 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 BDH1Q02338 343 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 IL18R1Q13478 541 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 HES1Q14469 280 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 KPNB1Q14974 876 aaKnown RBP6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 HLA-DRB5Q30154 266 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 TP53I3Q53FA7 332 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 AADACL4Q5VUY2 407 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 SLX4IPQ5VYV7 408 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 FAM53AQ6NSI3 398 aaPredicted RBP6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 Q6ZSR3 168 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 C16orf82Q7Z2V1 217 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 SPATA24Q86W54 205 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 DRAM1Q8N682 238 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 OR10AC1Q8NH08 325 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 DPF1Q92782 380 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 RAX2Q96IS3 184 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 NSL1Q96IY1 281 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 AKR1E2Q96JD6 320 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 P2RX4Q99571 388 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 CHST5Q9GZS9 411 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 MOB1AQ9H8S9 216 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 PAPOLBQ9NRJ5 636 aaKnown RBP6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 CLN6Q9NWW5 311 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 DNAJB9Q9UBS3 223 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 UBE2J1Q9Y385 318 aaPredicted RBP6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 U3KQK5 164 aa6.82□□□□□ -1.32
SHKBP1-220ENST00000599716 TRGV10A0A0A0MS01 117 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 IGHV3-72A0A0B4J1Y9 119 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 TRBV2A0A0J9YWF9 115 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 SERPINE3A8MV23 424 aa6.81□□□□□ -1.32
SHKBP1-220ENST00000599716 TOR1AO14656 332 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms