RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 GPR31O00270 319 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 SEC11BP0C7V7 166 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 SELLP14151 372 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 SYN1P17600 705 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 PMCHP20382 165 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 SEC61GP60059 68 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 SERF2P84101 59 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 FZD5Q13467 585 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 ETFDHQ16134 617 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 HAGHQ16775 308 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 BEX5Q5H9J7 111 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 TIMM23BQ5SRD1 257 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 NSUN5P2Q63ZY6 315 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 STUMQ69YW2 141 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 TEPPQ6URK8 271 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 SLC36A1Q7Z2H8 476 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 OR5AU1Q8NGC0 362 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 OR8B3Q8NGG8 313 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 LHFPL5Q8TAF8 219 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 SMIM4Q8WVI0 70 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 DUX5Q96PT3 197 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 OR8B2Q96RD0 313 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 ELF4Q99607 663 aaPredicted RBP3.81□□□□□ -1.8
RTTN-206ENST00000581161 HEXA-AS1Q9H8Q6 139 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 NOX4Q9NPH5 578 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 TBX21Q9UL17 535 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 C19orf53Q9UNZ5 99 aaPredicted RBP3.81□□□□□ -1.8
RTTN-206ENST00000581161 A0A0A6YYD5 115 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 MFSD2BA6NFX1 497 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 PHF1O43189 567 aaPredicted RBP3.81□□□□□ -1.8
RTTN-206ENST00000581161 SELENOFO60613 162 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 FBXO45P0C2W1 286 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 FTH1P19P0C7X4 201 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 TRGC1P0CF51 173 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 CXCL2P19875 107 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 OMGP23515 440 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 TSPOP30536 169 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 S100A11P31949 105 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 ARF6P62330 175 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 HIST1H3AP68431 136 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 KLF9Q13886 244 aaPredicted RBP3.81□□□□□ -1.8
RTTN-206ENST00000581161 DEFB134Q4QY38 66 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 ZNF841Q6ZN19 808 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 SLC39A11Q8N1S5 342 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 ZNF511Q8NB15 262 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 RGP1Q92546 391 aaPredicted RBP3.81□□□□□ -1.8
RTTN-206ENST00000581161 STARD4Q96DR4 205 aa3.81□□□□□ -1.8
RTTN-206ENST00000581161 STRAPQ9Y3F4 350 aaKnown RBP3.81□□□□□ -1.8
RTTN-206ENST00000581161 IGHV3OR16-12A0A075B7B8 117 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 SERINC4A6NH21 518 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 NME2P1O60361 137 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 KRASP01116 189 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 SP1P08047 785 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 HOXB5P09067 269 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 NUTF2P61970 127 aaKnown RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 SHHQ15465 462 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 SLC22A6Q4U2R8 563 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 TMEM215Q68D42 235 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 LHFPL4Q7Z7J7 247 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 LGI3Q8N145 548 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 OR2D3Q8NGH3 330 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 DUSP19Q8WTR2 217 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 TSLPQ969D9 159 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 MS4A4EQ96PG1 132 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 ADAT1Q9BUB4 502 aaKnown RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 GEMIN7Q9H840 131 aaKnown RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 FOXJ3Q9UPW0 622 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 IER3IP1Q9Y5U9 82 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 EML5Q05BV3 1969 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 K7ESF4 209 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 DUS4LO95620 317 aaKnown RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 SEMA4FO95754 770 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 ADRB1P08588 477 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 KLF3P57682 345 aaPredicted RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 TRA2BP62995 288 aaKnown RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 RPEL1Q2QD12 228 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 IGSF11Q5DX21 431 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 GLDNQ6ZMI3 551 aaPredicted RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 TGIF2LXQ8IUE1 241 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 TMEFF1Q8IYR6 380 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 OR6V1Q8N148 313 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 TMEM252Q8N6L7 170 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 PRR7Q8TB68 274 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 MARVELD3Q96A59 401 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 PTX4Q96A99 478 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 UBE2ZQ9H832 354 aaPredicted RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 KLF13Q9Y2Y9 288 aaPredicted RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 TRAV39A0A0B4J263 110 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 NRG2O14511 850 aaPredicted RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 WDR1O75083 606 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 F13BP05160 661 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 HOXD4P09016 255 aaPredicted RBP3.8□□□□□ -1.8
RTTN-206ENST00000581161 ZGLP1P0C6A0 271 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 TDGF1P13385 188 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 HAAOP46952 286 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 TNFSF10P50591 281 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 TDGF1P3P51864 188 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 NTHL1P78549 312 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 FAM3AP98173 230 aa3.8□□□□□ -1.8
RTTN-206ENST00000581161 SMAD2Q15796 467 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms