RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 POU3F4P49335 361 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 AP2S1P53680 142 aaPredicted RBP8.22□□□□□ -1.09
GGA3-209ENST00000580646 INSL4Q14641 139 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 ZNF146Q15072 292 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 TIMM50Q3ZCQ8 353 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 ESCO2Q56NI9 601 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 SPIN3Q5JUX0 258 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 GLT8D1Q68CQ7 371 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 ZNF841Q6ZN19 808 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 GDPGP1Q6ZNW5 385 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 LRRTM1Q86UE6 522 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 ASCC1Q8N9N2 400 aaKnown RBP8.22□□□□□ -1.09
GGA3-209ENST00000580646 BOLLQ8N9W6 283 aaKnown RBP8.22□□□□□ -1.09
GGA3-209ENST00000580646 DEFB108BQ8NET1 73 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 CAPSLQ8WWF8 208 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 SLAMF9Q96A28 289 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 ORAI1Q96D31 301 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 SPACA5Q96QH8 159 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 GPER1Q99527 375 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 SSBP3Q9BWW4 388 aaPredicted RBP8.22□□□□□ -1.09
GGA3-209ENST00000580646 GON7Q9BXV9 100 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 PPIL3Q9H2H8 161 aaKnown RBP8.22□□□□□ -1.09
GGA3-209ENST00000580646 SLA2Q9H6Q3 261 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 PCDHB16Q9NRJ7 776 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 SNTG1Q9NSN8 517 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 GHRLQ9UBU3 117 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 STUB1Q9UNE7 303 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 IGKV1D-17A0A075B6S4 117 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 IGHV3OR15-7A0A075B7D8 119 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 A0A0G2JMP0 313 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 A0A0X1KG70 313 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 SIGLEC5O15389 551 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 TMPRSS2O15393 492 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 ADAM20O43506 726 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 TCF21O43680 179 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 ECDO95905 644 aaPredicted RBP8.21□□□□□ -1.1
GGA3-209ENST00000580646 AVPP01185 164 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 GYPAP02724 150 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 MAS1P04201 325 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 UBBP0CG47 229 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 TMEM225BP0DP42 221 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 PRKACAP17612 351 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 ADRA2CP18825 462 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 AMY2BP19961 511 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 BCL3P20749 454 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 CBX5P45973 191 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 PITPNBP48739 271 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 CAV3P56539 151 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 FGF12P61328 243 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 GNB2P62879 340 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 IL13RA1P78552 427 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 HOXA4Q00056 320 aaPredicted RBP8.21□□□□□ -1.1
GGA3-209ENST00000580646 GPR176Q14439 515 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 NHLRC3Q5JS37 347 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 C1orf100Q5SVJ3 147 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 FAM27D1Q5T7N8 215 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 DCAF12L2Q5VW00 463 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 CD276Q5ZPR3 534 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 LYPD2Q6UXB3 125 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 C1orf229Q6ZS94 237 aaPredicted RBP8.21□□□□□ -1.1
GGA3-209ENST00000580646 RNF144BQ7Z419 303 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 FAM58AQ8N1B3 248 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 ZNF561Q8N587 486 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 TEX29Q8N6K0 151 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 C19orf18Q8NEA5 215 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 OR4M2Q8NGB6 313 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 OR51T1Q8NGJ9 327 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 TNFAIP8L1Q8WVP5 186 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 EMG1Q92979 244 aaKnown RBP8.21□□□□□ -1.1
GGA3-209ENST00000580646 RFT1Q96AA3 541 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 MRPS24Q96EL2 167 aaKnown RBP8.21□□□□□ -1.1
GGA3-209ENST00000580646 ZNF488Q96MN9 340 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 GAFA1Q96PS6 74 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 C19orf24Q9BVV8 132 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 TMPRSS13Q9BYE2 586 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 FAM234AQ9H0X4 552 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 LIN7BQ9HAP6 207 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 CTSZQ9UBR2 303 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 CLN8Q9UBY8 286 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 GLS2Q9UI32 602 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 GSTK1Q9Y2Q3 226 aa8.21□□□□□ -1.1
GGA3-209ENST00000580646 LOC105371242A0A075B767 164 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 RFPL4AA6NLU0 287 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 RFPL4AL1F8VTS6 287 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 F8VVB4 439 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 F8VWA3 439 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 J3QLI3 93 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 PDCD5O14737 125 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 SHOXO15266 292 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 ANGPTL7O43827 346 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 CLPXO76031 633 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 PLATP00750 562 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 SFTPBP07988 381 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 CHRM2P08172 466 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 CD36P16671 472 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 MYL9P24844 172 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 LMO1P25800 156 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 ZFP36P26651 326 aaKnown RBP8.2□□□□□ -1.1
GGA3-209ENST00000580646 PRDX2P32119 198 aa8.2□□□□□ -1.1
GGA3-209ENST00000580646 OR3A4PP47883 348 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms