RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 BTG1P62324 171 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 IL13RA2Q14627 380 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 HFEQ30201 348 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 ACP7Q6ZNF0 438 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A1Q86YD7 464 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 CMTM4Q8IZR5 234 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 BATF2Q8N1L9 274 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 FAM89BQ8N5H3 189 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 C15orf40Q8WUR7 153 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 CCL17Q92583 94 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 S100A16Q96FQ6 103 aaKnown RBP10.85□□□□□ -0.67
SPG7-209ENST00000564047 Q96M66 194 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 THAP7Q9BT49 309 aaPredicted RBP10.85□□□□□ -0.67
SPG7-209ENST00000564047 SELENOIQ9C0D9 397 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 ATG5Q9H1Y0 275 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 TREM2Q9NZC2 230 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 ZNF221Q9UK13 617 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 ST3GAL6Q9Y274 331 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 CACNG2Q9Y698 323 aa10.85□□□□□ -0.67
SPG7-209ENST00000564047 A0A0A6YYH2 397 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 LINC00854A0A1B0GVQ3 168 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM240BA0A1B0GVZ2 78 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A10PA6NDY2 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A18PA6NE21 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A16PA6NEW6 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A20PA6NIJ5 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 A6NJ64 397 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A8PA6NJQ4 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A7PA6NKC0 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A22PA8MWA6 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A12PA8MX19 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A5PA8MXJ8 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A23PA8MXZ1 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 TMEM178BH3BS89 294 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.84□□□□□ -0.67
SPG7-209ENST00000564047 WNT9BO14905 357 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 KNG1P01042 644 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A15PP0C7V4 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A13PP0C7W8 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A14PP0C7W9 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FAM90A24PP0C7X0 464 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 DAOP14920 347 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 EGR1P18146 543 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 MNDAP41218 407 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 ZNF146Q15072 292 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 MPV17LQ2QL34 196 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 SMIM21Q3B7S5 101 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 SPIN3Q5JUX0 258 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 RSBN1Q5VWQ0 802 aaPredicted RBP10.84□□□□□ -0.67
SPG7-209ENST00000564047 ZNF57Q68EA5 555 aaPredicted RBP10.84□□□□□ -0.67
SPG7-209ENST00000564047 RAB12Q6IQ22 244 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 FIP1L1Q6UN15 594 aaKnown RBP10.84□□□□□ -0.67
SPG7-209ENST00000564047 LINC00596Q86U02 117 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 BIVMQ86UB2 503 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 TGIF2LYQ8IUE0 185 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 OR56B1Q8NGI3 324 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 OR6F1Q8NGZ6 308 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 YIPF5Q969M3 257 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 CREB3L1Q96BA8 519 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 NUDT16L1Q9BRJ7 211 aaKnown RBP10.84□□□□□ -0.67
SPG7-209ENST00000564047 MARVELD1Q9BSK0 173 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 WDR13Q9H1Z4 485 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 MMP28Q9H239 520 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 LIME1Q9H400 295 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 SEBOXQ9HB31 216 aaPredicted RBP10.84□□□□□ -0.67
SPG7-209ENST00000564047 DIABLOQ9NR28 239 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 ZNF701Q9NV72 531 aaPredicted RBP10.84□□□□□ -0.67
SPG7-209ENST00000564047 EDARQ9UNE0 448 aa10.84□□□□□ -0.67
SPG7-209ENST00000564047 ROS1P08922 2347 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 H3BUI4 141 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 RAB27BO00194 218 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 ORC5O43913 435 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 RP2O75695 350 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 FSTL3O95633 263 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 PAX1P15863 534 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 COL8A2P25067 703 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 SLC6A1P30531 599 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 GMFBP60983 142 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 MRPS10P82664 201 aaKnown RBP10.83□□□□□ -0.68
SPG7-209ENST00000564047 TAF9Q16594 264 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 PIGYQ3MUY2 71 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 TEX36Q5VZQ5 186 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 BOLLQ8N9W6 283 aaKnown RBP10.83□□□□□ -0.68
SPG7-209ENST00000564047 PHF21AQ96BD5 680 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 ABHD1Q96SE0 405 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 GAL3ST1Q99999 423 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 NICN1Q9BSH3 213 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 DCAF16Q9NXF7 216 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 COPZ2Q9P299 210 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 NLKQ9UBE8 527 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 IL36RNQ9UBH0 155 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 DNAJB11Q9UBS4 358 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 GLS2Q9UI32 602 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 PLEKHA6Q9Y2H5 1048 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 JMJD1CQ15652 2540 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 AKAP6Q13023 2319 aa10.83□□□□□ -0.68
SPG7-209ENST00000564047 PPIAL4EA0A075B759 164 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 A0A0A6YYD4 124 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 OOEPA6NGQ2 149 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 CENPXA8MT69 81 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms