RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 SATL1Q86VE3 508 aa12.91□□□□□ -0.34
CHMP1A-206ENST00000549139 ORAI1Q96D31 301 aa12.91□□□□□ -0.34
CHMP1A-206ENST00000549139 SNX22Q96L94 193 aa12.91□□□□□ -0.34
CHMP1A-206ENST00000549139 OR14A2Q96R54 314 aa12.91□□□□□ -0.34
CHMP1A-206ENST00000549139 GPER1Q99527 375 aa12.91□□□□□ -0.34
CHMP1A-206ENST00000549139 CITED1Q99966 193 aa12.91□□□□□ -0.34
CHMP1A-206ENST00000549139 YTHDF1Q9BYJ9 559 aaKnown RBP12.91□□□□□ -0.34
CHMP1A-206ENST00000549139 MMP27Q9H306 513 aa12.91□□□□□ -0.34
CHMP1A-206ENST00000549139 CKLFQ9UBR5 152 aa12.91□□□□□ -0.34
CHMP1A-206ENST00000549139 GLS2Q9UI32 602 aa12.91□□□□□ -0.34
CHMP1A-206ENST00000549139 NOTCH3Q9UM47 2321 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 TRBV23-1A0A0A0MS06 115 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 A0A1B0GUS0 222 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 GABRPO00591 440 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 MRPS14O60783 128 aaKnown RBP12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 ZNF737O75373 536 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 SFTPBP07988 381 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 IGHV4-38-2P0DP08 117 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 PRKACAP17612 351 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 EEF1B2P24534 225 aaKnown RBP12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 MAPK3P27361 379 aaPredicted RBP12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 BMXP51813 675 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 TPBGQ13641 420 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 PDCD1Q15116 288 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 ELP2Q6IA86 826 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 ASCL4Q6XD76 172 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 C1orf122Q6ZSJ8 110 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 CMTM4Q8IZR5 234 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 KIR3DL3Q8N743 410 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 OR5D13Q8NGL4 314 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 DERL3Q96Q80 235 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 TBX15Q96SF7 602 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 PCGF1Q9BSM1 259 aa12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 MS4A7Q9GZW8 240 aaPredicted RBP12.9□□□□□ -0.34
CHMP1A-206ENST00000549139 TRAV40A0A0B4J280 105 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 A0A1W2PPK0 400 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 SH2D1BO14796 132 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 PIN1P1O15428 100 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 HAND1O96004 215 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 LMO1P25800 156 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 ZNF93P35789 620 aaPredicted RBP12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 MTNR1BP49286 362 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 GABARAPL2P60520 117 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 MLLT11Q13015 90 aaPredicted RBP12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 ACSM3Q53FZ2 586 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 DDI2Q5TDH0 399 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 CDH26Q8IXH8 852 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 Q8NFD4 153 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 TBC1D15Q8TC07 691 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 UFD1Q92890 307 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 ELL3Q9HB65 397 aaPredicted RBP12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 IL36RNQ9UBH0 155 aa12.89□□□□□ -0.35
CHMP1A-206ENST00000549139 RYR3Q15413 4870 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 TRAV8-7A0A075B6U6 113 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 A0A1W2PQ09 198 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 M0R1W7 72 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 SC5DO75845 299 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 CALCBP10092 127 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 PTGFRP43088 359 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 MAP2K4P45985 399 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 KRTAP10-3P60369 221 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 RPL31P62899 125 aaKnown RBP12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 RELBQ01201 579 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 TBCEQ15813 527 aaPredicted RBP12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 GPR157Q5UAW9 335 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 METAP1DQ6UB28 335 aaPredicted RBP12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 C17orf107Q6ZR85 190 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 OR8H2Q8N162 312 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 ASCC1Q8N9N2 400 aaKnown RBP12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 PPP1R35Q8TAP8 253 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 TNFAIP8L1Q8WVP5 186 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 MGLLQ99685 303 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 PRDM13Q9H4Q3 707 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 NOX4Q9NPH5 578 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 C19orf12Q9NSK7 152 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 ONECUT1Q9UBC0 465 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 GSTK1Q9Y2Q3 226 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 KIAA2026Q5HYC2 2103 aa12.88□□□□□ -0.35
CHMP1A-206ENST00000549139 CENPVL3A0A0U1RRI6 287 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 MDFIC2A0A1B0GVS7 189 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 A0A1W2PPH5 198 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 TMEM82A0PJX8 343 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 MEGF11A6BM72 1044 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 HSMCR30P0CW71 290 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 CPEP16870 476 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 DUSP1P28562 367 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 BLMHQ13867 455 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 TRAM1Q15629 374 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 FBLN7Q53RD9 439 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 LIPKQ5VXJ0 399 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 VMO1Q7Z5L0 202 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 FAM185AQ8N0U4 392 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 Q8N7P7 452 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 OR51T1Q8NGJ9 327 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 TMED9Q9BVK6 235 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 METTL9Q9H1A3 318 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 BEX1Q9HBH7 125 aa12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 EXOSC4Q9NPD3 245 aaKnown RBP12.87□□□□□ -0.35
CHMP1A-206ENST00000549139 ACOT13Q9NPJ3 140 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms